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CAZyme Information: FOZG_16536-t36_1-p1

You are here: Home > Sequence: FOZG_16536-t36_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Fusarium oxysporum
Lineage Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium oxysporum
CAZyme ID FOZG_16536-t36_1-p1
CAZy Family GT20
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
640 70129.50 5.3785
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_FoxysporumFo47 18556 660027 365 18191
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in FOZG_16536-t36_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA3 23 634 7.2e-92 0.9911971830985915

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
235000 PRK02106 6.93e-53 127 636 83 533
choline dehydrogenase; Validated
225186 BetA 3.45e-52 37 630 21 529
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
398739 GMC_oxred_C 1.48e-31 499 630 5 143
GMC oxidoreductase. This domain found associated with pfam00732.
215420 PLN02785 2.74e-18 289 633 235 574
Protein HOTHEAD
366272 GMC_oxred_N 1.02e-13 124 394 19 218
GMC oxidoreductase. This family of proteins bind FAD as a cofactor.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 640 1 640
0.0 1 640 1 640
0.0 1 640 1 640
0.0 1 640 1 640
0.0 1 640 1 640

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.63e-39 22 636 6 562
Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis]
5.33e-39 22 636 82 638
Chain AAA, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis]
6.28e-39 22 636 6 562
Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRV_AAA Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRX_AAA Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRZ_AAA Chain AAA, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis]
6.28e-39 22 636 6 562
Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis]
6.28e-39 22 636 6 562
Chain A, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis],6ZH7_B Chain B, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7.68e-49 22 636 5 537
Oxygen-dependent choline dehydrogenase OS=Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000) OX=223283 GN=betA PE=3 SV=1
2.69e-48 22 636 3 535
Oxygen-dependent choline dehydrogenase OS=Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5) OX=220664 GN=betA PE=3 SV=1
3.75e-48 22 636 5 537
Oxygen-dependent choline dehydrogenase OS=Pseudomonas syringae pv. syringae (strain B728a) OX=205918 GN=betA PE=3 SV=1
9.56e-48 22 636 3 535
Oxygen-dependent choline dehydrogenase OS=Pseudomonas fluorescens (strain SBW25) OX=216595 GN=betA PE=3 SV=1
6.38e-47 22 636 3 535
Oxygen-dependent choline dehydrogenase OS=Pseudomonas fluorescens (strain Pf0-1) OX=205922 GN=betA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000712 0.999267 CS pos: 15-16. Pr: 0.9768

TMHMM  Annotations      help

There is no transmembrane helices in FOZG_16536-t36_1-p1.