CAZyme Information: FOZG_14646-t36_1-p1

Basic Information

• Species: Fusarium oxysporum
• Lineage: Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium oxysporum
• CAZyme ID: FOZG_14646-t36_1-p1
• CAZy Family: GH7
• CAZyme Description: choline dehydrogenase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
640		68954.70	4.4398

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_FoxysporumFo47	18556	660027	365	18191

• Gene Location: location=JH717907.1:228615-230537(-)

Full Sequence      

MRHAFFAGLLAAPASVCAVALTGYEYIVVGSGAGGGPLAARLALAGHKTLLIEAGDDYAS
LNYTVPAYSANASEDPEISWNFFVRHYADDERQARDYKTTYDTPDGEYTGLNPPEGAEIK
GTLYPRTQALGGCTAHNALIAVYPHQSDFEYIASLTGDDSWSADNMRKYFVKAEDNNYRP
AGEAGHGYDGWLSTETAPLSIPLNDEQLLSILSGGAVALSEMTGKNITMDGLIADDANAD
TLARDQEPGFYQIPLSTKDASRIGPRELILSVRDAKHPNGTKKYPLDVRTNCYVTKVTFD
DSKPPRANGVEFLDGKHLYKASPLATGAAGTPGNATASREVVVAGGVYNTPQILKLSGIG
PADELKKFDIPVISDLPGVGTNLQDHYEISVQGTLENNFTSFDGCTFGLFTDEDPCVDRW
RAPVDGDHGIYSSSGLAASMFYKSSTAEKDNFDIFAFGGPVNFRGYFPQYAVNATIEHNW
FSWAILKAHPRNNAGEVLLQSADPLDMPAITFNYFDTGNGDYSADLQALYEAVELTRSAL
ASQAVNVTEVLPGADVTSQKDIETYVKDVAWGHHASSTCPIGADDDKMAVLDSKFRVRGV
TGLRVVDASVYPRIPGTFTAVSTYMVAEKAADIMLAELEE

Enzyme Prediction     

No EC number prediction in FOZG_14646-t36_1-p1.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
AA3	23	636	5.1e-97	0.9947183098591549

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
235000	PRK02106	1.85e-71	24	635	6	532	choline dehydrogenase; Validated
225186	BetA	7.96e-68	24	637	8	536	Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
398739	GMC_oxred_C	7.24e-32	495	630	5	143	GMC oxidoreductase. This domain found associated with pfam00732.
215420	PLN02785	5.09e-21	24	617	56	559	Protein HOTHEAD
366272	GMC_oxred_N	1.12e-15	122	388	19	218	GMC oxidoreductase. This family of proteins bind FAD as a cofactor.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QKD59010.1|AA3	0.0	1	640	1	640
QGI67549.1|AA3	0.0	1	640	1	640
CCT71796.1|AA3	0.0	1	640	1	640
QGI98432.1|AA3	0.0	1	640	1	640
UPK90837.1|AA3	0.0	1	640	1	641

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6YS2_AAA	1.17e-40	24	634	8	560	Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis]
6YRU_AAA	1.59e-40	24	634	8	560	Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRV_AAA Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRX_AAA Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRZ_AAA Chain AAA, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis]
6ZH7_A	1.59e-40	24	634	8	560	Chain A, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis],6ZH7_B Chain B, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis]
6YS1_AAA	1.59e-40	24	634	8	560	Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis]
5NCC_A	1.92e-40	24	634	24	576	Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_B Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_C Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_D Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_E Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_F Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|Q1C932|BETA_YERPA	1.76e-51	24	632	3	529	Oxygen-dependent choline dehydrogenase OS=Yersinia pestis bv. Antiqua (strain Antiqua) OX=360102 GN=betA PE=3 SV=1
sp|Q8ZGW0|BETA_YERPE	1.76e-51	24	632	3	529	Oxygen-dependent choline dehydrogenase OS=Yersinia pestis OX=632 GN=betA PE=3 SV=1
sp|Q1CFR7|BETA_YERPN	1.76e-51	24	632	3	529	Oxygen-dependent choline dehydrogenase OS=Yersinia pestis bv. Antiqua (strain Nepal516) OX=377628 GN=betA PE=3 SV=1
sp|Q66D54|BETA_YERPS	2.42e-51	24	632	3	529	Oxygen-dependent choline dehydrogenase OS=Yersinia pseudotuberculosis serotype I (strain IP32953) OX=273123 GN=betA PE=3 SV=1
sp|B2K8U4|BETA_YERPB	2.42e-51	24	632	3	529	Oxygen-dependent choline dehydrogenase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) OX=502801 GN=betA PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.085464	0.914513	CS pos: 18-19. Pr: 0.8773

TMHMM  Annotations     

There is no transmembrane helices in FOZG_14646-t36_1-p1.