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CAZyme Information: FOZG_10447-t36_2-p1

You are here: Home > Sequence: FOZG_10447-t36_2-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Fusarium oxysporum
Lineage Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium oxysporum
CAZyme ID FOZG_10447-t36_2-p1
CAZy Family GH28
CAZyme Description murein transglycosylase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
452 JH717902.1|CGC12 48340.09 5.3641
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_FoxysporumFo47 18556 660027 365 18191
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.171:11

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 66 375 6.3e-47 0.9661538461538461

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
215540 PLN03010 1.10e-19 42 376 48 391
polygalacturonase
177865 PLN02218 1.29e-19 29 374 62 418
polygalacturonase ADPG
215426 PLN02793 3.85e-18 5 377 20 412
Probable polygalacturonase
165802 PLN02155 1.65e-16 42 376 29 380
polygalacturonase
395231 Glyco_hydro_28 1.70e-14 148 380 85 321
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 451 1 451
0.0 1 451 1 451
0.0 1 451 1 451
0.0 1 451 1 451
0.0 1 451 1 451

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.66e-178 21 432 1 414
Rhamnogalacturonase A From Aspergillus Aculeatus [Aspergillus aculeatus]
1.14e-16 48 373 23 373
Crystal structure of endo-xylogalacturonan hydrolase from Aspergillus tubingensis [Aspergillus tubingensis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6.39e-191 5 431 2 431
Rhamnogalacturonase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=rhgA PE=2 SV=2
6.41e-181 21 445 19 446
Probable rhamnogalacturonase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=rhgA PE=3 SV=1
3.10e-179 3 443 2 445
Probable rhamnogalacturonase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=rhgA PE=3 SV=1
8.83e-179 3 443 2 445
Probable rhamnogalacturonase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=rhgA PE=3 SV=1
1.21e-178 21 445 19 446
Rhamnogalacturonase A OS=Aspergillus niger OX=5061 GN=rhgA PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000360 0.999615 CS pos: 18-19. Pr: 0.9769

TMHMM  Annotations      help

There is no transmembrane helices in FOZG_10447-t36_2-p1.