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CAZyme Information: FOYG_15985-t42_1-p1

You are here: Home > Sequence: FOYG_15985-t42_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Fusarium oxysporum
Lineage Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium oxysporum
CAZyme ID FOYG_15985-t42_1-p1
CAZy Family GT35
CAZyme Description choline dehydrogenase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
673 JH717849.1|CGC2 72550.33 6.3011
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_FoxysporumNRRL32931 17642 660029 362 17280
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in FOYG_15985-t42_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA3 43 668 2.9e-92 0.9947183098591549

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
235000 PRK02106 3.05e-57 311 666 216 531
choline dehydrogenase; Validated
225186 BetA 5.73e-56 62 671 26 538
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
398739 GMC_oxred_C 2.90e-30 515 662 2 143
GMC oxidoreductase. This domain found associated with pfam00732.
215420 PLN02785 3.90e-26 311 648 235 558
Protein HOTHEAD
366272 GMC_oxred_N 6.16e-14 144 415 19 218
GMC oxidoreductase. This family of proteins bind FAD as a cofactor.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 673 1 673
0.0 1 673 1 668
0.0 1 673 1 668
0.0 1 673 1 668
0.0 1 673 1 668

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.03e-38 40 669 37 600
Crystal structure of pyranose dehydrogenase from Agaricus meleagris, wildtype [Leucoagaricus meleagris]
2.47e-31 43 666 1 561
Crystal structure of aryl-alcohol oxidase from Pleurotus eryngii in complex with p-anisic acid [Pleurotus eryngii]
8.85e-31 41 666 5 560
Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis]
1.08e-30 43 666 2 562
Crystal structure of aryl-alcohol-oxidase from Pleurotus eryingii [Pleurotus eryngii]
1.19e-30 41 666 5 560
Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.89e-42 43 666 4 533
Oxygen-dependent choline dehydrogenase OS=Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5) OX=220664 GN=betA PE=3 SV=1
4.16e-42 42 667 1 526
Oxygen-dependent choline dehydrogenase OS=Agrobacterium fabrum (strain C58 / ATCC 33970) OX=176299 GN=betA PE=3 SV=2
1.24e-40 42 667 1 526
Oxygen-dependent choline dehydrogenase OS=Brucella anthropi (strain ATCC 49188 / DSM 6882 / CCUG 24695 / JCM 21032 / LMG 3331 / NBRC 15819 / NCTC 12168 / Alc 37) OX=439375 GN=betA PE=3 SV=1
2.16e-40 43 666 4 533
Oxygen-dependent choline dehydrogenase OS=Pseudomonas fluorescens (strain SBW25) OX=216595 GN=betA PE=3 SV=1
6.71e-40 44 667 5 531
Oxygen-dependent choline dehydrogenase OS=Vibrio vulnificus (strain YJ016) OX=196600 GN=betA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000874 0.999108 CS pos: 19-20. Pr: 0.9618

TMHMM  Annotations      help

There is no transmembrane helices in FOYG_15985-t42_1-p1.