logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: FOYG_14984-t42_1-p1

You are here: Home > Sequence: FOYG_14984-t42_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Fusarium oxysporum
Lineage Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium oxysporum
CAZyme ID FOYG_14984-t42_1-p1
CAZy Family GT2
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
484 JH717848.1|CGC8 53835.64 5.1662
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_FoxysporumNRRL32931 17642 660029 362 17280
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in FOYG_14984-t42_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 191 450 7.5e-34 0.7292307692307692

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
227721 Pgu1 2.95e-05 183 314 223 338
Polygalacturonase [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 484 1 484
0.0 1 483 1 483
0.0 1 483 1 483
0.0 1 483 1 483
0.0 1 483 1 483

PDB Hits      help

FOYG_14984-t42_1-p1 has no PDB hit.

Swiss-Prot Hits      help

FOYG_14984-t42_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000313 0.999684 CS pos: 23-24. Pr: 0.9738

TMHMM  Annotations      help

There is no transmembrane helices in FOYG_14984-t42_1-p1.