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CAZyme Information: FOYG_13829-t42_1-p1

You are here: Home > Sequence: FOYG_13829-t42_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Fusarium oxysporum
Lineage Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium oxysporum
CAZyme ID FOYG_13829-t42_1-p1
CAZy Family GH76
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
640 70261.66 5.6337
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_FoxysporumNRRL32931 17642 660029 362 17280
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in FOYG_13829-t42_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA3 23 636 3e-93 0.9947183098591549

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
225186 BetA 1.07e-52 37 630 21 529
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
235000 PRK02106 2.04e-51 127 630 83 527
choline dehydrogenase; Validated
398739 GMC_oxred_C 4.60e-32 499 630 5 143
GMC oxidoreductase. This domain found associated with pfam00732.
215420 PLN02785 1.26e-17 289 633 235 574
Protein HOTHEAD
366272 GMC_oxred_N 1.49e-13 124 394 19 218
GMC oxidoreductase. This family of proteins bind FAD as a cofactor.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 640 1 640
0.0 1 640 1 640
0.0 1 640 1 640
0.0 1 640 1 640
0.0 1 640 1 640

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.12e-38 22 630 6 556
Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis]
2.88e-38 22 630 6 556
Chain A, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis],6ZH7_B Chain B, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis]
2.88e-38 22 630 6 556
Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis]
2.88e-38 22 630 6 556
Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRV_AAA Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRX_AAA Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRZ_AAA Chain AAA, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis]
3.23e-38 22 630 82 632
Chain AAA, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.56e-49 22 629 5 530
Oxygen-dependent choline dehydrogenase OS=Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000) OX=223283 GN=betA PE=3 SV=1
1.05e-48 22 629 5 530
Oxygen-dependent choline dehydrogenase OS=Pseudomonas syringae pv. syringae (strain B728a) OX=205918 GN=betA PE=3 SV=1
9.56e-48 22 629 3 528
Oxygen-dependent choline dehydrogenase OS=Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5) OX=220664 GN=betA PE=3 SV=1
2.47e-47 22 629 3 528
Oxygen-dependent choline dehydrogenase OS=Pseudomonas fluorescens (strain SBW25) OX=216595 GN=betA PE=3 SV=1
3.45e-47 22 629 5 530
Oxygen-dependent choline dehydrogenase OS=Pseudomonas savastanoi pv. phaseolicola (strain 1448A / Race 6) OX=264730 GN=betA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000712 0.999267 CS pos: 15-16. Pr: 0.9768

TMHMM  Annotations      help

There is no transmembrane helices in FOYG_13829-t42_1-p1.