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CAZyme Information: FOYG_13343-t42_1-p1

You are here: Home > Sequence: FOYG_13343-t42_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Fusarium oxysporum
Lineage Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium oxysporum
CAZyme ID FOYG_13343-t42_1-p1
CAZy Family GH55
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
387 42184.25 8.6159
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_FoxysporumNRRL32931 17642 660029 362 17280
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.1.1.11:3

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 105 364 2.3e-76 0.90625

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
215357 PLN02665 2.07e-48 92 373 63 343
pectinesterase family protein
395871 Pectinesterase 3.74e-46 97 360 2 271
Pectinesterase.
178113 PLN02497 2.13e-44 94 360 31 299
probable pectinesterase
178051 PLN02432 1.23e-43 92 360 8 265
putative pectinesterase
178372 PLN02773 9.22e-42 96 360 4 275
pectinesterase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
4.44e-238 53 387 1 335
9.32e-177 53 387 1 323
9.32e-177 53 387 1 323
9.32e-177 53 387 1 323
9.32e-177 53 387 1 323

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.02e-97 88 387 2 299
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
5.69e-97 88 387 2 299
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
2.31e-28 128 360 39 278
Pectin methylesterase from Carrot [Daucus carota]
3.20e-18 128 360 35 274
Chain A, Pectinesterase 1 [Solanum lycopersicum]
9.32e-15 108 312 43 269
Pectin methylesterase from Yersinia enterocolitica [Yersinia enterocolitica subsp. enterocolitica 8081]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.88e-105 78 387 17 324
Probable pectinesterase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pmeA PE=3 SV=1
2.88e-105 78 387 17 324
Probable pectinesterase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pmeA PE=3 SV=1
1.32e-103 60 387 1 324
Probable pectinesterase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pmeA PE=3 SV=1
4.49e-99 74 387 14 324
Probable pectinesterase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pmeA PE=3 SV=1
4.64e-99 89 387 29 325
Pectinesterase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pmeA PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.999992 0.000018

TMHMM  Annotations      help

There is no transmembrane helices in FOYG_13343-t42_1-p1.