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CAZyme Information: FOYG_12140-t42_1-p1

You are here: Home > Sequence: FOYG_12140-t42_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Fusarium oxysporum
Lineage Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium oxysporum
CAZyme ID FOYG_12140-t42_1-p1
CAZy Family GH43
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
2622 272327.25 4.7069
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_FoxysporumNRRL32931 17642 660029 362 17280
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC - - - - -

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 1158 1454 1.5e-68 0.9826388888888888
CE8 1863 2150 1.1e-63 0.96875
CE8 1506 1793 8.3e-62 0.9444444444444444
CE8 823 1096 7.5e-51 0.9166666666666666
CE8 408 673 6.5e-25 0.9270833333333334

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395871 Pectinesterase 9.38e-43 1158 1455 3 296
Pectinesterase.
178051 PLN02432 4.93e-39 1157 1460 13 292
putative pectinesterase
215357 PLN02665 1.46e-38 1863 2144 75 348
pectinesterase family protein
178372 PLN02773 4.66e-37 1157 1469 7 314
pectinesterase
395871 Pectinesterase 6.97e-36 1505 1785 2 266
Pectinesterase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 2622 1 2622
0.0 1 2622 1 2587
0.0 1 2622 1 2587
0.0 1 2622 1 2587
0.0 1 2622 1 2562

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.54e-39 1168 1461 19 296
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
4.68e-39 1168 1461 19 296
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
2.69e-26 1154 1460 6 308
Pectin methylesterase from Carrot [Daucus carota]
1.76e-24 1155 1460 3 304
Chain A, Pectinesterase 1 [Solanum lycopersicum]
9.35e-15 814 1057 7 278
Chain A, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.75e-46 1149 1452 12 319
Pectinesterase OS=Aspergillus niger OX=5061 GN=pme1 PE=1 SV=1
9.37e-45 1151 1461 22 327
Pectinesterase OS=Aspergillus aculeatus OX=5053 GN=pme1 PE=2 SV=1
6.54e-40 1505 1823 37 325
Pectinesterase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pmeA PE=1 SV=1
5.83e-39 1168 1461 47 324
Probable pectinesterase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pmeA PE=3 SV=1
2.10e-37 1496 1823 29 324
Probable pectinesterase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pmeA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000225 0.999772 CS pos: 19-20. Pr: 0.9767

TMHMM  Annotations      help

There is no transmembrane helices in FOYG_12140-t42_1-p1.