CAZyme Information: FOXG_13573-t26_1-p1

Basic Information

• Species: Fusarium oxysporum
• Lineage: Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium oxysporum
• CAZyme ID: FOXG_13573-t26_1-p1
• CAZy Family: GH45
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
347	CM000600.1|CGC19	38507.60	8.3351

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_Foxysporum4287	21354	426428	429	20925

• Gene Location: location=CM000600.1:1294173-1295286(-)

Full Sequence      

MDRAVVPVLAVPLLVTSRMQLMLPVQETPFISERSYNNEEVIIDGDKMPGTPAALGASLA
GKDRGIFHVEKAEYWRFIHITLTKGPYGVYVKDSHNNYFERLTTHSNYETGFHMQNSISN
NEIVYLDTYNNADPRNNGQNADGMAIKEGSGAGNIIRGIRSYENSDDGIDLYEFKSSVTI
LDNIIFDNGVNRWNFNPHRGDGIGIKLGGGSPANRANVNHVARNNFSFRNRRGFSDNNMP
GDMTLIHNTAWKNREEGFNQRTSMATYENNLAANNAGSSSLSKQNTLNSVKGKGNNWEKG
GSWQDADFKATSTSLVKGRRQADGKITRSDFLRPVDGGNYGATTHWV

Enzyme Prediction     

No EC number prediction in FOXG_13573-t26_1-p1.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL9	33	334	6.6e-115	0.8097982708933718

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
404168	Beta_helix	1.38e-05	87	191	24	116	Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QKD61899.1|PL9_3	4.55e-228	34	347	81	394
QGI99232.1|PL9_3	4.15e-224	34	347	81	394
QGI68339.1|PL9_3	4.15e-224	34	347	81	394
CCT72704.1|PL9_3	4.15e-224	34	347	81	394
QGI85557.1|PL9_3	4.15e-224	34	347	81	394

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
1RU4_A	1.27e-40	73	333	115	368	Chain A, Pectate lyase [Dickeya chrysanthemi]
5OLQ_A	7.86e-16	91	259	141	324	Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLQ_B Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLQ_C Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_A Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_B Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_C Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLS_A Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|P0C1A7|PLYL_DICD3	1.04e-39	73	333	140	393	Pectate lyase L OS=Dickeya dadantii (strain 3937) OX=198628 GN=pelL PE=1 SV=1
sp|P0C1A6|PLYL_DICCH	2.02e-39	73	333	140	393	Pectate lyase L OS=Dickeya chrysanthemi OX=556 GN=pelL PE=3 SV=1
sp|P22751|PLYX_DICCH	2.29e-12	64	253	455	639	Pectate disaccharide-lyase OS=Dickeya chrysanthemi OX=556 GN=pelX PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	CS Position
0.999574	0.000446

TMHMM  Annotations     

There is no transmembrane helices in FOXG_13573-t26_1-p1.