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CAZyme Information: FOXG_12330-t26_1-p1

You are here: Home > Sequence: FOXG_12330-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Fusarium oxysporum
Lineage Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium oxysporum
CAZyme ID FOXG_12330-t26_1-p1
CAZy Family GH3
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
329 34880.76 9.1987
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Foxysporum4287 21354 426428 429 20925
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in FOXG_12330-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 27 306 1.2e-77 0.9409722222222222

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
178051 PLN02432 7.18e-42 15 307 2 275
putative pectinesterase
178113 PLN02497 1.79e-41 26 315 34 318
probable pectinesterase
395871 Pectinesterase 6.69e-41 26 301 2 275
Pectinesterase.
215367 PLN02682 1.54e-39 15 305 60 348
pectinesterase family protein
215357 PLN02665 2.39e-39 12 305 62 341
pectinesterase family protein

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.02e-231 1 329 1 329
1.39e-229 1 329 1 329
1.39e-229 1 329 1 329
1.39e-229 1 329 1 329
1.39e-229 1 329 1 329

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.45e-72 17 328 2 299
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
2.45e-72 17 328 2 299
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
1.52e-29 33 292 15 272
Pectin methylesterase from Carrot [Daucus carota]
5.21e-26 33 292 11 268
Chain A, Pectinesterase 1 [Solanum lycopersicum]
4.84e-11 28 292 8 310
Chain A, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.54e-104 9 328 11 330
Pectinesterase OS=Aspergillus aculeatus OX=5053 GN=pme1 PE=2 SV=1
1.01e-102 2 329 4 330
Pectinesterase OS=Aspergillus niger OX=5061 GN=pme1 PE=1 SV=1
9.38e-75 17 328 27 324
Probable pectinesterase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pmeA PE=3 SV=1
9.38e-75 17 328 27 324
Probable pectinesterase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pmeA PE=3 SV=1
5.96e-73 17 328 27 324
Probable pectinesterase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pmeA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000252 0.999727 CS pos: 15-16. Pr: 0.9779

TMHMM  Annotations      help

There is no transmembrane helices in FOXG_12330-t26_1-p1.