logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: FOXG_04765-t26_1-p1

You are here: Home > Sequence: FOXG_04765-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Fusarium oxysporum
Lineage Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium oxysporum
CAZyme ID FOXG_04765-t26_1-p1
CAZy Family CBM38|GH32
CAZyme Description murein transglycosylase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
455 CM000595.1|CGC6 48864.83 6.9048
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Foxysporum4287 21354 426428 429 20925
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.171:11

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 66 378 2.8e-30 0.9661538461538461

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
215426 PLN02793 2.89e-12 5 380 20 412
Probable polygalacturonase
215540 PLN03010 1.19e-10 42 379 48 391
polygalacturonase
165802 PLN02155 4.49e-08 42 379 29 380
polygalacturonase
395231 Glyco_hydro_28 8.50e-07 148 383 85 321
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
215120 PLN02188 1.77e-05 5 181 8 188
polygalacturonase/glycoside hydrolase family protein

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
5.73e-297 1 454 1 451
6.79e-291 1 454 1 451
6.79e-291 1 454 1 451
6.79e-291 1 454 1 451
6.79e-291 1 454 1 451

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7.20e-146 21 435 1 414
Rhamnogalacturonase A From Aspergillus Aculeatus [Aspergillus aculeatus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.25e-156 5 434 2 431
Rhamnogalacturonase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=rhgA PE=2 SV=2
2.75e-148 21 448 19 446
Probable rhamnogalacturonase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=rhgA PE=3 SV=1
6.37e-147 3 446 2 445
Probable rhamnogalacturonase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=rhgA PE=3 SV=1
1.81e-146 3 446 2 445
Probable rhamnogalacturonase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=rhgA PE=3 SV=1
6.22e-146 1 453 1 454
Probable rhamnogalacturonase B OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=rhgB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000359 0.999613 CS pos: 18-19. Pr: 0.9768

TMHMM  Annotations      help

There is no transmembrane helices in FOXG_04765-t26_1-p1.