CAZyme Information: FOMG_17983-t38_1-p1

Basic Information

• Species: Fusarium oxysporum
• Lineage: Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium oxysporum
• CAZyme ID: FOMG_17983-t38_1-p1
• CAZy Family: GT35
• CAZyme Description: endo-beta-1,6-galactanase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
482	KI980360.1|CGC1	53372.08	5.3814

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_Foxysporum26406	20033	1089452	372	19661

• Gene Location: location=KI980360.1:15624-17072(-)

Full Sequence      

MHCRHLFSLALAAVSIHVSVADKSSTVDPTSNWGTWEGWGVSLAWWAKAFGDRDDLATLF
FSADSETLNGQNLPGLWFNIVRYNAGAGSSNSIDGSQMVVSPNILPSRQMDGFWIDWASS
NTSSSSWDWAVDKNQRSMLLKALDRGATIFELFSNSPMWWMCKNHNPSGSDGGTTDNLQS
WNYDQHAVYLASIAKYAHDNWGINFNSVEALNEPSTNYWKSNGTQEGCHFEVATQGIIIK
NMRDELDKHGLEAIAVSASDETSYDDAVATWKSLSSDAKAKVNRINVHGYQGGGGRRDEL
YSLAKGAGKQLWNSEYGDGDGSGKGLYQNLLLDLKWLHPTAWVYWQAVDIQGWGLIVGDN
DKKTLGSATQKYFVLAQFTRHIRPGMQILSASDVDSIAAYDAENKKLVIVAANWGNAQYL
NFDLSMFNSPGQDGSLVPRWSTHTGGGESYVNHQDTFLKGKRFWSWFESGTVQTFEVSNV
SL

Enzyme Prediction     

EC	3.2.1.164:3

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH30	26	475	1.3e-148	0.9956140350877193

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
405300	Glyco_hydr_30_2	6.65e-11	27	349	6	357	O-Glycosyl hydrolase family 30.
227807	XynC	6.00e-05	141	475	110	426	O-Glycosyl hydrolase [Cell wall/membrane/envelope biogenesis].
396577	Glyco_hydro_59	0.008	159	324	77	230	Glycosyl hydrolase family 59.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ULA70973.1|GH30_5	4.04e-233	6	482	10	487
BAC84995.1|GH30_5|3.2.1.164	1.91e-229	8	482	8	478
QYS96886.1|GH30_5	1.56e-223	8	482	8	477
UKZ49110.1|GH30_5	2.57e-222	8	482	8	477
UKZ75639.1|GH30_5	2.57e-222	8	482	8	477

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
1NOF_A	1.76e-08	141	428	70	339	Chain A, xylanase [Dickeya chrysanthemi],2Y24_A Chain A, XYLANASE [Dickeya chrysanthemi]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|Q76FP5|6GAL_HYPRU	3.39e-230	8	482	8	478	Endo-beta-1,6-galactanase OS=Hypocrea rufa OX=5547 GN=6GAL PE=1 SV=1
sp|A0A401ETL2|EXGAL_BIFL2	2.81e-09	13	349	24	445	Exo-beta-1,6-galactobiohydrolase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=bl1,6Gal PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000263	0.999706	CS pos: 21-22. Pr: 0.9808

TMHMM  Annotations     

There is no transmembrane helices in FOMG_17983-t38_1-p1.