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CAZyme Information: FOMG_17329-t38_1-p1

You are here: Home > Sequence: FOMG_17329-t38_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Fusarium oxysporum
Lineage Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium oxysporum
CAZyme ID FOMG_17329-t38_1-p1
CAZy Family GT2|GT2
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
163 17411.54 4.7870
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Foxysporum26406 20033 1089452 372 19661
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in FOMG_17329-t38_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH93 1 122 5.5e-22 0.3745928338762215

CDD Domains      help

FOMG_17329-t38_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.23e-120 1 163 233 395
6.49e-96 1 160 237 397
4.07e-83 1 161 229 394
2.06e-45 1 159 207 357
1.41e-26 1 159 236 383

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.82e-19 1 140 212 344
Chain A, Alpha-l-arabinofuranosidase [Fusarium graminearum]
1.82e-19 1 140 212 344
Chain A, Exo-1,5-alpha-l-arabinofuranobiosidase [Fusarium graminearum],5M1Z_A Chain A, Exo-1,5-alpha-L-arabinofuranobiosidase [Fusarium graminearum]
9.09e-19 3 140 214 344
Chain A, ALPHA-L-ARABINOFURANOSIDASE [Fusarium graminearum]
1.25e-18 1 140 212 344
Chain A, Exo-1,5-alpha-l-arabinofuranobiosidase [Fusarium graminearum],2YDP_B Chain B, Exo-1,5-alpha-l-arabinofuranobiosidase [Fusarium graminearum],2YDP_C Chain C, Exo-1,5-alpha-l-arabinofuranobiosidase [Fusarium graminearum]
2.56e-10 12 138 217 335
High resolution structure of Penicillium chrysogenum alpha-L-arabinanase [Penicillium chrysogenum],3A72_A High resolution structure of Penicillium chrysogenum alpha-L-arabinanase complexed with arabinobiose [Penicillium chrysogenum]

Swiss-Prot Hits      help

FOMG_17329-t38_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000048 0.000017

TMHMM  Annotations      help

There is no transmembrane helices in FOMG_17329-t38_1-p1.