CAZyme Information: FOMG_17318-t38_1-p1

Basic Information

• Species: Fusarium oxysporum
• Lineage: Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium oxysporum
• CAZyme ID: FOMG_17318-t38_1-p1
• CAZy Family: GT69
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
601		65529.27	8.1069

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_Foxysporum26406	20033	1089452	372	19661

• Gene Location: location=JH659371.1:61014-62869(+)

Full Sequence      

MHFSTLLVHGVLATGATASRGWRIRRDDDIIDPGQPSDCTWWETKIEDYQDCAYLEGSWH
LKHSQFVEYNPTVKDDCSGMQLGHSYCVEVNNGLPREGEASQSTTTQAAEPEPTKESKYS
PTQDGLIDTCTSFYQAKKGDTCPKIIAGYKTFDFDDFFKWNPAIDKDCSGIWAGYWYCVG
VPGTPPSVPTMTTVTSTKRTGPSKPTATQEGIISSCTAFHMAAKGETCDKIVASYGTFDF
DAFFKWNPAVGKDCSGIWANYYYCVGVPGTPTVKPSATSPKPTATGIPTPSPIQEGMVKN
CNKFHPVSKTTTCSSIEKYYNLPLSQFLAWNPAVGKDCSGLWANYYVCVSVEGYKPSPTT
TAKPPTTKPANGISTPSPIQNGMVKNCEKFHQIKSTTTCTSIENYYNLPFETFLSWNPAV
GKDCTALLTNYWVCIATIGWKPPTKTTAKPAATATKGSNGISTPLPIQTGMVSNCNKFHT
VKSTTTCDSIQNYYKISLADFVKWNPAVGSKCTGLWTNYNVCVGVIGGTPTKPSNGVTTP
SPIQSGMVSNCKKFHPVASTTTCDSIQKYYKITMEQLVKWNPAVGSKCTGLWAKYYVCVG
V

Enzyme Prediction     

EC	-	-

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
212030	LysM	1.47e-06	477	521	1	45	Lysin Motif is a small domain involved in binding peptidoglycan. LysM, a small globular domain with approximately 40 amino acids, is a widespread protein module involved in binding peptidoglycan in bacteria and chitin in eukaryotes. The domain was originally identified in enzymes that degrade bacterial cell walls, but proteins involved in many other biological functions also contain this domain. It has been reported that the LysM domain functions as a signal for specific plant-bacteria recognition in bacterial pathogenesis. Many of these enzymes are modular and are composed of catalytic units linked to one or several repeats of LysM domains. LysM domains are found in bacteria and eukaryotes.
212030	LysM	3.15e-05	303	347	1	45	Lysin Motif is a small domain involved in binding peptidoglycan. LysM, a small globular domain with approximately 40 amino acids, is a widespread protein module involved in binding peptidoglycan in bacteria and chitin in eukaryotes. The domain was originally identified in enzymes that degrade bacterial cell walls, but proteins involved in many other biological functions also contain this domain. It has been reported that the LysM domain functions as a signal for specific plant-bacteria recognition in bacterial pathogenesis. Many of these enzymes are modular and are composed of catalytic units linked to one or several repeats of LysM domains. LysM domains are found in bacteria and eukaryotes.
212030	LysM	3.87e-05	219	263	2	45	Lysin Motif is a small domain involved in binding peptidoglycan. LysM, a small globular domain with approximately 40 amino acids, is a widespread protein module involved in binding peptidoglycan in bacteria and chitin in eukaryotes. The domain was originally identified in enzymes that degrade bacterial cell walls, but proteins involved in many other biological functions also contain this domain. It has been reported that the LysM domain functions as a signal for specific plant-bacteria recognition in bacterial pathogenesis. Many of these enzymes are modular and are composed of catalytic units linked to one or several repeats of LysM domains. LysM domains are found in bacteria and eukaryotes.
197609	LysM	0.003	478	523	1	44	Lysin motif.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QKD61254.1|CBM50	0.0	1	601	1	599
QKD59082.1|CBM50	0.0	1	601	1	599
QGI87027.1|CBM50	0.0	1	601	1	661
QGI69682.1|CBM50	0.0	1	601	1	686
QGJ00570.1|CBM50	0.0	1	601	1	686

PDB Hits     

FOMG_17318-t38_1-p1 has no PDB hit.

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|D4ALG0|LYSM1_ARTBC	3.24e-110	247	600	98	456	LysM domain-containing protein ARB_05157 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=ARB_05157 PE=1 SV=1
sp|D4B4P8|LYSM2_ARTBC	3.02e-19	36	187	26	187	LysM domain-containing protein ARB_03438 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=ARB_03438 PE=3 SV=1
sp|D4AVW3|LYSM5_ARTBC	2.46e-16	130	357	262	542	LysM domain-containing protein ARB_00327 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=ARB_00327 PE=3 SV=2
sp|D4AZ68|LYSM3_ARTBC	1.27e-15	449	601	241	408	LysM domain-containing protein ARB_01488 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=ARB_01488 PE=3 SV=1
sp|D4B5F9|PGDA_ARTBC	1.05e-11	529	601	351	437	Probable peptidoglycan-N-acetylglucosamine deacetylase ARB_03699 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=ARB_03699 PE=1 SV=2

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	CS Position
0.676248	0.323758

TMHMM  Annotations     

There is no transmembrane helices in FOMG_17318-t38_1-p1.