dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: FOMG_14541-t38_1-p1

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Basic Information help

Species

Fusarium oxysporum

Lineage

Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium oxysporum

CAZyme ID

FOMG_14541-t38_1-p1

CAZy Family

GH72

CAZyme Description

murein transglycosylase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
388		41139.47	5.9393

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_Foxysporum26406	20033	1089452	372	19661

Gene Location

Full Sequence Download help

Enzyme Prediction help

No EC number prediction in FOMG_14541-t38_1-p1.

CAZyme Signature Domains help

Family	Start	End	Evalue	family coverage
AA9	67	291	1.1e-52	0.9818181818181818

CDD Domains download full data without filtering help

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
410622	LPMO_AA9	6.63e-66	79	305	1	216	lytic polysaccharide monooxygenase (LPMO) auxiliary activity family 9 (AA9). AA9 proteins are copper-dependent lytic polysaccharide monooxygenases (LPMOs) involved in the cleavage of cellulose chains with oxidation of carbons C1 and/or C4 and C6. Activities include lytic cellulose monooxygenase (C1-hydroxylating) (EC 1.14.99.54) and lytic cellulose monooxygenase (C4-dehydrogenating) (EC 1.14.99.56). The family used to be called GH61 because weak endoglucanase activity had been demonstrated in some family members.
397484	Glyco_hydro_61	2.53e-50	107	297	18	211	Glycosyl hydrolase family 61. Although weak endoglucanase activity has been demonstrated in several members of this family, they lack the clustered conserved catalytic acidic amino acids present in most glycoside hydrolases. Many members of this family lack measurable cellulase activity on their own, but enhance the activity of other cellulolytic enzymes. They are therefore unlikely to be true glycoside hydrolases. The subsrate-binding surface of this family is a flat Ig-like fold.

CAZyme Hits help

Hit ID	E-Value	Query Start	Query End	Hit Start
6.27e-218	62	388	1	327
5.68e-185	62	388	1	322
2.96e-180	62	388	1	322
2.96e-180	62	388	1	322
2.96e-180	62	388	1	322

PDB Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
1.24e-19	79	305	1	212	Lytic polysaccharide monooxygenase 9F from Neurospora crassa, NcLPMO9F [Neurospora crassa],4QI8_B Lytic polysaccharide monooxygenase 9F from Neurospora crassa, NcLPMO9F [Neurospora crassa]
4.98e-18	115	307	37	225	Crystal structure of HiLPMO9B [Heterobasidion irregulare TC 32-1],5NNS_B Crystal structure of HiLPMO9B [Heterobasidion irregulare TC 32-1]
3.84e-17	79	307	1	217	Chain A, GLYCOSIDE HYDROLASE FAMILY 61 PROTEIN D [Phanerodontia chrysosporium],4B5Q_B Chain B, GLYCOSIDE HYDROLASE FAMILY 61 PROTEIN D [Phanerodontia chrysosporium]
1.26e-13	107	311	35	231	Crystal Structure of a Cellulose-active Polysaccharide Monooxygenase from M. thermophila (MtPMO3) [Thermothelomyces thermophilus ATCC 42464],5UFV_B Crystal Structure of a Cellulose-active Polysaccharide Monooxygenase from M. thermophila (MtPMO3) [Thermothelomyces thermophilus ATCC 42464],5UFV_C Crystal Structure of a Cellulose-active Polysaccharide Monooxygenase from M. thermophila (MtPMO3) [Thermothelomyces thermophilus ATCC 42464],5UFV_D Crystal Structure of a Cellulose-active Polysaccharide Monooxygenase from M. thermophila (MtPMO3) [Thermothelomyces thermophilus ATCC 42464],5UFV_E Crystal Structure of a Cellulose-active Polysaccharide Monooxygenase from M. thermophila (MtPMO3) [Thermothelomyces thermophilus ATCC 42464],5UFV_F Crystal Structure of a Cellulose-active Polysaccharide Monooxygenase from M. thermophila (MtPMO3) [Thermothelomyces thermophilus ATCC 42464]
4.63e-12	87	308	9	221	Chain A, LYTIC POLYSACCHARIDE MONOOXYGENASE [Panus similis],5ACG_A Chain A, LYTIC POLYSACCHARIDE MONOOXYGENASE [Panus similis],5ACH_A Chain A, LYTIC POLYSACCHARIDE MONOOXYGENASE [Panus similis],5ACI_A Chain A, LYTIC POLYSACCHARIDE MONOOXYGENASE [Panus similis],5ACJ_A Chain A, LYTIC POLYSACCHARIDE MONOOXYGENASE [Panus similis],5N04_A Chain A, Auxiliary activity 9 [Panus similis],5N05_A Chain A, Auxiliary activity 9 [Panus similis],5NKW_A Chain A, Auxiliary activity 9 [Panus similis],5NLN_A Chain A, Auxiliary activity 9 [Panus similis],5NLO_A Chain A, Auxiliary activity 9 [Panus similis],5NLP_A Chain A, Auxiliary activity 9 [Panus similis],5NLQ_A Chain A, Auxiliary activity 9 [Panus similis],5NLR_A Chain A, Auxiliary activity 9 [Panus similis],5NLS_A Chain A, Auxiliary activity 9 [Panus similis],6YDG_A Chain A, Auxiliary activity 9 [Panus similis],7NIM_A Chain A, Auxiliary activity 9 [Panus similis],7NIN_A Chain A, Auxiliary activity 9 [Panus similis]

Swiss-Prot Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
9.50e-22	61	322	2	248	Probable endo-beta-1,4-glucanase D OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=eglD PE=3 SV=1
5.78e-21	61	310	2	237	Probable endo-beta-1,4-glucanase D OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=eglD PE=3 SV=1
7.99e-21	61	316	2	241	Probable endo-beta-1,4-glucanase D OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=eglD PE=3 SV=1
1.49e-20	61	310	2	237	Probable endo-beta-1,4-glucanase D OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=eglD PE=3 SV=1
1.06e-18	64	310	6	240	Probable endo-beta-1,4-glucanase D OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=eglD PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other	SP_Sec_SPI	CS Position
0.999986	0.000028

TMHMM Annotations help

There is no transmembrane helices in FOMG_14541-t38_1-p1.