CAZyme Information: FOMG_13293-t38_1-p1

Basic Information

• Species: Fusarium oxysporum
• Lineage: Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium oxysporum
• CAZyme ID: FOMG_13293-t38_1-p1
• CAZy Family: GH43
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
539	JH659340.1|CGC1	60177.87	6.5573

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_Foxysporum26406	20033	1089452	372	19661

• Gene Location: location=JH659340.1:368609-370305(+)

Full Sequence      

MTVVEKLDETNYDYVVVGGGTAGCVIASRLAEKLPYAEILLIEGGANDFKNETILNLKCL
LDLWGAEDYDYGYSSVPQPFGNSNIIHSRAKMLGGCSSHNGGISFVPFDMDMKKWQKMGA
DGWTHAEMVRLFKKLRNNIIPIAEDQRSQITKDWIESCSKLFNVPKVEDFNKQIIRDGRL
TPGTGYVSCTYTPDNNHRSSASVAYIHPILRGDEFRPNLTILHKTWTSKIHVKDQTAVGV
RATTDAGTTYDIYARKEVILCAGAVDTPRLMMLSGLGNRQQLEKLGIEVHQDLPGVGENL
QDHVESMYMWEIKDEVPQDKIVMGSEACMVLRREPENAQGDDGDAIDTMFHMFTVPFDFY
TKTMGYETPKNAFCCIPYNPRPASVGRLYLTSANPKVKPALDQRYFSDEKGYDKASNLWM
LKQARKMAQSEPFRKHLLREIAPGPMITTDDQLCEYGRQVSNTVYHPCGTAKMGDTQRDA
MAVVDASLHVKGIKNLRVADASVFPCMVSINPMITVLCIGERAAELIIADSKTAPRPSL

Enzyme Prediction     

No EC number prediction in FOMG_13293-t38_1-p1.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
AA3	11	529	3.1e-128	0.9947183098591549

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
225186	BetA	3.43e-107	11	536	7	542	Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
235000	PRK02106	7.95e-100	12	527	6	531	choline dehydrogenase; Validated
398739	GMC_oxred_C	1.04e-36	382	523	1	143	GMC oxidoreductase. This domain found associated with pfam00732.
215420	PLN02785	4.24e-25	8	520	53	569	Protein HOTHEAD
366272	GMC_oxred_N	4.27e-24	69	305	1	218	GMC oxidoreductase. This family of proteins bind FAD as a cofactor.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QKD61121.1|AA3_2	0.0	1	539	1	539
QMW36122.1|AA3_2	2.53e-214	8	531	11	533
QRD92907.1|AA3_2	2.53e-214	8	531	11	533
QMW48182.1|AA3_2	2.53e-214	8	531	11	533
BAE65509.1|AA3_2	2.53e-214	8	531	11	533

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3NNE_A	5.76e-95	4	527	6	526	Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_B Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_C Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_D Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_E Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_F Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_G Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_H Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis]
2JBV_A	5.76e-95	4	527	6	526	Crystal structure of choline oxidase reveals insights into the catalytic mechanism [Arthrobacter globiformis],2JBV_B Crystal structure of choline oxidase reveals insights into the catalytic mechanism [Arthrobacter globiformis],4MJW_A Crystal Structure of Choline Oxidase in Complex with the Reaction Product Glycine Betaine [Arthrobacter globiformis],4MJW_B Crystal Structure of Choline Oxidase in Complex with the Reaction Product Glycine Betaine [Arthrobacter globiformis]
3LJP_A	2.26e-94	4	527	6	526	Chain A, Choline oxidase [Arthrobacter globiformis],3LJP_B Chain B, Choline oxidase [Arthrobacter globiformis]
4YNT_A	1.69e-56	7	534	1	571	Crystal structure of Aspergillus flavus FAD glucose dehydrogenase [Aspergillus flavus NRRL3357],4YNU_A Crystal structure of Aspergillus flavus FADGDH in complex with D-glucono-1,5-lactone [Aspergillus flavus NRRL3357]
5OC1_A	2.09e-42	11	530	1	564	Crystal structure of aryl-alcohol oxidase from Pleurotus eryngii in complex with p-anisic acid [Pleurotus eryngii]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|Q7X2H8|CHOX_ARTGO	2.96e-94	4	527	6	526	Choline oxidase OS=Arthrobacter globiformis OX=1665 GN=codA PE=1 SV=1
sp|B9JBA2|BETA_AGRRK	5.48e-62	13	534	4	532	Oxygen-dependent choline dehydrogenase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) OX=311403 GN=betA PE=3 SV=1
sp|Q9WWW2|ALKJ_PSEPU	2.20e-61	12	528	2	528	Alcohol dehydrogenase [acceptor] OS=Pseudomonas putida OX=303 GN=alkJ PE=3 SV=1
sp|Q6LGH5|BETA_PHOPR	4.24e-61	10	535	3	538	Oxygen-dependent choline dehydrogenase OS=Photobacterium profundum (strain SS9) OX=298386 GN=betA PE=3 SV=1
sp|A6X2G7|BETA_BRUA4	5.58e-61	13	534	4	532	Oxygen-dependent choline dehydrogenase OS=Brucella anthropi (strain ATCC 49188 / DSM 6882 / CCUG 24695 / JCM 21032 / LMG 3331 / NBRC 15819 / NCTC 12168 / Alc 37) OX=439375 GN=betA PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	CS Position
1.000062	0.000002

TMHMM  Annotations     

There is no transmembrane helices in FOMG_13293-t38_1-p1.