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FOMG_13248-t38_1-p1
Basic Information
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Species
Fusarium oxysporum
Lineage
Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium oxysporum
CAZyme ID
FOMG_13248-t38_1-p1
CAZy Family
GH43
CAZyme Description
hypothetical protein
CAZyme Property
Protein Length
CGC
Molecular Weight
Isoelectric Point
477
52723.41
5.0388
Genome Property
Genome Version/Assembly ID
Genes
Strain NCBI Taxon ID
Non Protein Coding Genes
Protein Coding Genes
FungiDB-61_Foxysporum26406
20033
1089452
372
19661
Gene Location
No EC number prediction in FOMG_13248-t38_1-p1.
Family
Start
End
Evalue
family coverage
GH28
179
442
8.8e-36
0.7476923076923077
Cdd ID
Domain
E-Value
qStart
qEnd
sStart
sEnd
Domain Description
227721
Pgu1
2.83e-06
214
303
244
338
Polygalacturonase [Carbohydrate transport and metabolism].
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395231
Glyco_hydro_28
2.57e-04
165
405
8
273
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
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178580
PLN03003
0.005
203
333
133
256
Probable polygalacturonase At3g15720
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Hit ID
E-Value
Query Start
Query End
Hit Start
Hit End
0.0
1
477
1
477
5.05e-245
7
477
6
480
5.05e-245
7
477
6
480
5.05e-245
7
477
6
480
9.37e-210
1
473
1
485
FOMG_13248-t38_1-p1 has no PDB hit.
FOMG_13248-t38_1-p1 has no Swissprot hit.
This protein is predicted as OTHER
Other
SP_Sec_SPI
CS Position
1.000034
0.000003
There is no transmembrane helices in FOMG_13248-t38_1-p1.
