logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: FOMG_10191-t38_1-p1

You are here: Home > Sequence: FOMG_10191-t38_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Fusarium oxysporum
Lineage Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium oxysporum
CAZyme ID FOMG_10191-t38_1-p1
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
2597 JH659335.1|CGC10 270053.80 4.7307
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Foxysporum26406 20033 1089452 372 19661
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC - - - - -

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 1133 1429 9.3e-69 0.9826388888888888
CE8 1838 2125 8.9e-65 0.96875
CE8 1481 1768 5.8e-62 0.9444444444444444
CE8 798 1071 9.1e-51 0.9166666666666666
CE8 383 648 6.8e-25 0.9270833333333334

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395871 Pectinesterase 9.46e-43 1133 1430 3 296
Pectinesterase.
178051 PLN02432 1.43e-39 1132 1435 13 292
putative pectinesterase
215357 PLN02665 8.19e-38 1838 2119 75 348
pectinesterase family protein
178372 PLN02773 1.58e-37 1132 1444 7 314
pectinesterase
395871 Pectinesterase 1.01e-34 1480 1760 2 266
Pectinesterase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 2597 1 2622
0.0 1 2597 1 2587
0.0 1 2597 1 2587
0.0 1 2597 1 2587
0.0 1 2597 1 2562

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.36e-39 1126 1436 5 296
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
2.51e-39 1126 1436 5 296
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
2.66e-26 1126 1435 3 308
Pectin methylesterase from Carrot [Daucus carota]
2.36e-24 1130 1435 3 304
Chain A, Pectinesterase 1 [Solanum lycopersicum]
6.91e-15 789 1032 7 278
Chain A, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.73e-46 1126 1427 22 319
Pectinesterase OS=Aspergillus niger OX=5061 GN=pme1 PE=1 SV=1
2.73e-45 1126 1436 14 327
Pectinesterase OS=Aspergillus aculeatus OX=5053 GN=pme1 PE=2 SV=1
3.13e-39 1126 1436 33 324
Probable pectinesterase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pmeA PE=3 SV=1
7.26e-39 1487 1798 41 324
Probable pectinesterase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pmeA PE=3 SV=1
7.44e-39 1480 1798 37 325
Pectinesterase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pmeA PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000224 0.999756 CS pos: 19-20. Pr: 0.9765

TMHMM  Annotations      help

There is no transmembrane helices in FOMG_10191-t38_1-p1.