CAZyme Information: FOMG_08784-t38_1-p1

Basic Information

• Species: Fusarium oxysporum
• Lineage: Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium oxysporum
• CAZyme ID: FOMG_08784-t38_1-p1
• CAZy Family: GH16
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
384		42570.98	6.2494

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_Foxysporum26406	20033	1089452	372	19661

• Gene Location: location=JH659333.1:2925191-2926398(-)

Full Sequence      

MMIKSIILGLVYVATAYGAVLEKRAPAPFSNFTRNEFFKPAADAQLWGTLYARSLQLPDE
SLLMTWENYPAESKAYPVNHPIYKSVDGGATWSNFSAVKDTQNGWGMRFQPFLYTLPTDF
GGYARGTILAAGVSTPESLEGGVYIEVYASTDGAKTWEFVSHIAYGDGPNTIKNGDKALW
EPFFLMYKDQLVCYYSDQRDPKHAQKLVHTTTTDLKTWSDIVEDEAESSYDARPGMTTVA
HIESTNKWIMTWERCGVDACRVYYKVSDSPLTFGPIPGTRLKATDGSLFSSGPYVTWVRN
PYTSDGSGIIIVSTTSSENILIQGDNPAEGKWKKVDINHWSAYSRSVREITIKGTRRLLI
GNGGNFGDKKYNGVADAVVPIPTL

Enzyme Prediction     

No EC number prediction in FOMG_08784-t38_1-p1.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH93	49	351	5.7e-85	0.9609120521172638

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
271234	Sialidase_non-viral	0.004	55	168	205	304	Non-viral sialidases. Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates, they play vital roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial and eukaryotic sialidases.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QKD58936.1|GH93	5.81e-293	1	384	1	384
CCT69479.1|GH93	2.89e-270	2	384	1	383
QGI65308.1|GH93	1.37e-268	2	384	1	383
QGI96190.1|GH20|GH93	3.69e-253	2	377	1	376
QGI82557.1|GH20|GH93	2.00e-252	2	377	1	376

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
2YDT_A	8.53e-76	31	363	10	343	Chain A, Exo-1,5-alpha-l-arabinofuranobiosidase [Fusarium graminearum],5M1Z_A Chain A, Exo-1,5-alpha-L-arabinofuranobiosidase [Fusarium graminearum]
2W5N_A	1.20e-75	31	363	10	343	Chain A, Alpha-l-arabinofuranosidase [Fusarium graminearum]
2YDP_A	6.74e-75	31	363	10	343	Chain A, Exo-1,5-alpha-l-arabinofuranobiosidase [Fusarium graminearum],2YDP_B Chain B, Exo-1,5-alpha-l-arabinofuranobiosidase [Fusarium graminearum],2YDP_C Chain C, Exo-1,5-alpha-l-arabinofuranobiosidase [Fusarium graminearum]
2W5O_A	5.31e-74	31	347	10	327	Chain A, ALPHA-L-ARABINOFURANOSIDASE [Fusarium graminearum]
3A71_A	6.55e-72	25	364	2	335	High resolution structure of Penicillium chrysogenum alpha-L-arabinanase [Penicillium chrysogenum],3A72_A High resolution structure of Penicillium chrysogenum alpha-L-arabinanase complexed with arabinobiose [Penicillium chrysogenum]

Swiss-Prot Hits     

FOMG_08784-t38_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000413	0.999544	CS pos: 18-19. Pr: 0.9512

TMHMM  Annotations     

There is no transmembrane helices in FOMG_08784-t38_1-p1.