logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: FOMG_05173-t38_2-p1

You are here: Home > Sequence: FOMG_05173-t38_2-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Fusarium oxysporum
Lineage Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium oxysporum
CAZyme ID FOMG_05173-t38_2-p1
CAZy Family CE3
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
554 60566.12 5.1143
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Foxysporum26406 20033 1089452 372 19661
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in FOMG_05173-t38_2-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA3 221 487 2.7e-46 0.48905109489051096

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
366272 GMC_oxred_N 8.07e-58 275 498 4 218
GMC oxidoreductase. This family of proteins bind FAD as a cofactor.
225186 BetA 5.59e-22 218 509 1 316
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
235000 PRK02106 4.56e-06 420 495 224 300
choline dehydrogenase; Validated
235798 PRK06416 1.66e-05 222 279 2 63
dihydrolipoamide dehydrogenase; Reviewed
395718 FAD_binding_2 3.60e-05 226 257 1 32
FAD binding domain. This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.10e-127 13 544 10 535
4.16e-07 224 495 10 298
1.64e-06 220 489 16 310
3.29e-06 226 484 266 530
7.38e-06 224 484 5 266

PDB Hits      help

FOMG_05173-t38_2-p1 has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6.88e-52 221 525 235 541
Long-chain-alcohol oxidase FAO2 OS=Lotus japonicus OX=34305 GN=FAO2 PE=2 SV=1
1.13e-47 215 529 228 543
Long-chain-alcohol oxidase FAO4B OS=Arabidopsis thaliana OX=3702 GN=FAO4B PE=2 SV=2
1.00e-46 223 519 235 531
Long-chain-alcohol oxidase FAO1 OS=Lotus japonicus OX=34305 GN=FAO1 PE=1 SV=1
1.33e-46 219 519 227 531
Long-chain-alcohol oxidase FAO3 OS=Arabidopsis thaliana OX=3702 GN=FAO3 PE=1 SV=1
1.21e-42 218 533 217 528
Long-chain-alcohol oxidase FAO4A OS=Arabidopsis thaliana OX=3702 GN=FAO4A PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000059 0.000001

TMHMM  Annotations      help

There is no transmembrane helices in FOMG_05173-t38_2-p1.