logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: FOMG_01960-t38_1-p1

You are here: Home > Sequence: FOMG_01960-t38_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Fusarium oxysporum
Lineage Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium oxysporum
CAZyme ID FOMG_01960-t38_1-p1
CAZy Family AA3
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
616 JH659329.1|CGC17 68542.94 6.0538
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Foxysporum26406 20033 1089452 372 19661
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in FOMG_01960-t38_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH76 85 498 4.2e-54 0.7905027932960894

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
397638 Glyco_hydro_76 1.09e-14 225 441 121 296
Glycosyl hydrolase family 76. Family of alpha-1,6-mannanases.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 616 1 616
0.0 1 616 1 616
0.0 1 616 1 616
0.0 1 616 1 616
0.0 1 616 1 610

PDB Hits      help

FOMG_01960-t38_1-p1 has no PDB hit.

Swiss-Prot Hits      help

FOMG_01960-t38_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000223 0.999751 CS pos: 22-23. Pr: 0.9789

TMHMM  Annotations      help

There is no transmembrane helices in FOMG_01960-t38_1-p1.