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CAZyme Information: FOIG_15365-t36_1-p1

You are here: Home > Sequence: FOIG_15365-t36_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Fusarium odoratissimum
Lineage Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium odoratissimum
CAZyme ID FOIG_15365-t36_1-p1
CAZy Family GT22
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
477 52596.24 4.9473
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_FodoratissimumNRRL54006 16975 1089451 341 16634
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in FOIG_15365-t36_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 178 442 1.1e-34 0.7507692307692307

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
227721 Pgu1 6.41e-06 214 303 244 338
Polygalacturonase [Carbohydrate transport and metabolism].
395231 Glyco_hydro_28 8.34e-05 145 441 46 305
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
178580 PLN03003 0.003 210 333 140 256
Probable polygalacturonase At3g15720
215426 PLN02793 0.008 210 374 179 331
Probable polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 477 1 477
9.65e-243 6 477 5 480
9.65e-243 6 477 5 480
9.65e-243 6 477 5 480
2.31e-210 8 473 6 485

PDB Hits      help

FOIG_15365-t36_1-p1 has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7.41e-06 213 441 256 456
Probable endopolygalacturonase D OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pgaD PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000046 0.000005

TMHMM  Annotations      help

There is no transmembrane helices in FOIG_15365-t36_1-p1.