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CAZyme Information: FOIG_12467-t36_1-p1

You are here: Home > Sequence: FOIG_12467-t36_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Fusarium odoratissimum
Lineage Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium odoratissimum
CAZyme ID FOIG_12467-t36_1-p1
CAZy Family GH5
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
455 JH658295.1|CGC3 49957.19 6.1006
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_FodoratissimumNRRL54006 16975 1089451 341 16634
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.67:7 3.2.1.-:2

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 83 437 4.7e-73 0.9569230769230769

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395231 Glyco_hydro_28 3.46e-33 144 436 43 317
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
215540 PLN03010 2.23e-25 149 440 138 395
polygalacturonase
178580 PLN03003 1.50e-24 140 423 99 361
Probable polygalacturonase At3g15720
215426 PLN02793 1.58e-22 92 419 85 394
Probable polygalacturonase
215120 PLN02188 1.56e-21 228 434 193 390
polygalacturonase/glycoside hydrolase family protein

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 455 1 455
0.0 1 455 1 455
0.0 1 455 1 455
0.0 1 455 1 455
0.0 1 455 1 455

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.80e-65 58 443 19 382
Crystal structure of endo-xylogalacturonan hydrolase from Aspergillus tubingensis [Aspergillus tubingensis]
2.11e-19 142 407 66 311
Endopolygalacturonase from the phytopathogenic fungus Fusarium moniliforme [Fusarium verticillioides]
1.66e-17 86 390 6 292
Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_B Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_C Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_D Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_E Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_F Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger]
1.08e-16 142 392 73 302
Chain A, Endo-polygalacturonase [Evansstolkia leycettana]
1.45e-16 142 392 73 302
Chain A, endo-polygalacturonase [Evansstolkia leycettana]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.11e-147 39 443 34 431
Probable exopolygalacturonase X OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=pgaX PE=3 SV=1
3.95e-147 47 443 40 431
Probable exopolygalacturonase X OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pgaX PE=3 SV=2
3.95e-147 47 443 40 431
Probable exopolygalacturonase X OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pgaX PE=3 SV=2
2.26e-146 47 443 40 431
Probable exopolygalacturonase X OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pgaX PE=3 SV=2
6.37e-144 26 443 19 433
Exopolygalacturonase A OS=Aspergillus niger OX=5061 GN=pgxA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.032374 0.967609 CS pos: 21-22. Pr: 0.9290

TMHMM  Annotations      help

There is no transmembrane helices in FOIG_12467-t36_1-p1.