CAZyme Information: FOIG_10422-t36_1-p1

Basic Information

• Species: Fusarium odoratissimum
• Lineage: Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium odoratissimum
• CAZyme ID: FOIG_10422-t36_1-p1
• CAZy Family: GH3
• CAZyme Description: unspecified product

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
862	KK036127.1|CGC11	96008.41	8.9611

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_FodoratissimumNRRL54006	16975	1089451	341	16634

• Gene Location: location=KK036127.1:322902-325490(+)

Full Sequence      

MALSISRVSFEHYSSPLGIAETAPRISWRFDGNAPDWEQSSYDIQVSRSVSDKPKSFSSK
SSDSLYQPWPDTPLEEAQPVSVRVRAHGQSKQPSTPWSDWVSVETGLFKKSWENVKPIAS
TIKVDINVAKRPVYFRKDFKLPDDIASARLYITALGIYEAEINGKRVGDRVLAPGWQSFH
HRHVYDTYDVTKLLTPGSNAIGALVGEGWYAGLLGFAGGQRNIYGNSTGLLAQLHVKSKS
GKTVKIVTDTTWKSGFGPATAGEIYDGDRYNATLEADIKGWSKPGFKSSSWSDTRLLPAV
DGELVPAEQPPVRRVEEVKPQRFFKSASGKQLVDFGQNLVGWLRLNVDGPKNTTIRLRHA
EVLEDGELALRPLRLAKAEDYLTLSGKGPIQWEPKFTFHGFRYAELDGWPKETPLDANSV
KAIVVHTDLEETGYFNCSNPLFNKFHSNVRWSMKGNFLSIPTDCPQRDERLGWTGDAHAF
CPTSNYLYDTSAFWKGWHKDIWSEMSQNEMVPPFYVPSIPWFLDRPPKPASVWGDVVVAN
PWNIYQAFGDKKLLQEHLPQAQNWIDTGISRNDVGLWNRSSFQFGDWLDPLAPSDDPGAA
TTHKILVSDAYLIKMTETLSQIIGALGDSKLAKKYQTQRSDLKREFQNSWAPGGKLANRT
QTAYALSLAFDLLKDDKQKKAAADTLRDIIKNNDYLVGTGFAGTSPLGFALTGINATDVF
YRMLLQEKVPSWLYQVVMGGTTTWERWDSMLPNGTVNPGEMTSFNHYSFGSVANWMHQVI
GGIAPLEPGYKTVAIAPIPGGNLSHASATYVSQYGTISTDWTVTNGKFHLKVRIPPNTKA
KVTLPGKQKTKTVGSGYHEFTV

Enzyme Prediction     

EC	3.2.1.40:1	3.2.1.40:8	3.1.1.73:2

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH78	325	844	7.8e-168	0.9940476190476191
CBM67	129	297	8e-36	0.8806818181818182

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
407469	Bac_rhamnosid6H	3.56e-137	430	780	1	340	Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
400715	Bac_rhamnosid_N	3.38e-71	144	316	2	172	Alpha-L-rhamnosidase N-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. This domain is probably involved in substrate recognition.
336149	Bac_rhamnosid	2.39e-38	325	426	2	102	Bacterial alpha-L-rhamnosidase concanavalin-like domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
379972	Bac_rhamnosid_C	6.81e-24	782	859	1	78	Bacterial alpha-L-rhamnosidase C-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QKD61506.1|GH78	0.0	1	862	1	862
CZS79492.1|GH78	0.0	1	860	1	863
CEI67932.1|GH78	0.0	1	860	1	863
CEF76201.1|GH78	0.0	1	860	1	863
UPL02850.1|CBM67|GH78	0.0	1	860	1	863

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6GSZ_A	0.0	2	862	1	865	Crystal structure of native alfa-L-rhamnosidase from Aspergillus terreus [Aspergillus terreus]
3W5M_A	1.22e-169	112	862	292	1030	Crystal Structure of Streptomyces avermitilis alpha-L-rhamnosidase [Streptomyces avermitilis MA-4680 = NBRC 14893],3W5N_A Crystal Structure of Streptomyces avermitilis alpha-L-rhamnosidase complexed with L-rhamnose [Streptomyces avermitilis MA-4680 = NBRC 14893]
6I60_A	1.75e-133	11	845	38	899	Structure of alpha-L-rhamnosidase from Dictyoglumus thermophilum [Dictyoglomus thermophilum H-6-12],6I60_B Structure of alpha-L-rhamnosidase from Dictyoglumus thermophilum [Dictyoglomus thermophilum H-6-12]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|Q82PP4|RHA78_STRAW	4.46e-169	112	862	292	1030	Alpha-L-rhamnosidase OS=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680) OX=227882 GN=SAVERM_828 PE=1 SV=1
sp|T2KNB2|PLH20_FORAG	7.04e-163	11	845	42	879	Alpha-L-rhamnosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22090 PE=1 SV=2
sp|P9WF03|RHA78_ALTSL	6.40e-154	11	845	38	879	Alpha-L-rhamnosidase OS=Alteromonas sp. (strain LOR) OX=1537994 GN=LOR_34 PE=1 SV=1
sp|T2KPL4|PLH28_FORAG	4.97e-105	2	844	29	906	Alpha-L-rhamnosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22170 PE=2 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	CS Position
1.000041	0.000012

TMHMM  Annotations     

There is no transmembrane helices in FOIG_10422-t36_1-p1.