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CAZyme Information: FOIG_09706-t36_1-p1

You are here: Home > Sequence: FOIG_09706-t36_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Fusarium odoratissimum
Lineage Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium odoratissimum
CAZyme ID FOIG_09706-t36_1-p1
CAZy Family GH20
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
484 JH658287.1|CGC4 53936.70 4.9682
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_FodoratissimumNRRL54006 16975 1089451 341 16634
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in FOIG_09706-t36_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 191 450 2.1e-34 0.7292307692307692

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
227721 Pgu1 8.07e-05 183 314 223 338
Polygalacturonase [Carbohydrate transport and metabolism].
395231 Glyco_hydro_28 0.006 193 449 45 305
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 484 1 484
0.0 1 482 1 482
0.0 1 482 1 482
0.0 1 482 1 482
0.0 1 482 1 482

PDB Hits      help

FOIG_09706-t36_1-p1 has no PDB hit.

Swiss-Prot Hits      help

FOIG_09706-t36_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000263 0.999721 CS pos: 23-24. Pr: 0.9786

TMHMM  Annotations      help

There is no transmembrane helices in FOIG_09706-t36_1-p1.