logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: FOIG_04527-t36_1-p1

You are here: Home > Sequence: FOIG_04527-t36_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Fusarium odoratissimum
Lineage Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium odoratissimum
CAZyme ID FOIG_04527-t36_1-p1
CAZy Family CBM50
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
2541 264793.75 4.8418
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_FodoratissimumNRRL54006 16975 1089451 341 16634
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC - - - - -

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 1077 1373 4.3e-69 0.9826388888888888
CE8 1782 2069 6.8e-64 0.96875
CE8 1426 1712 5.3e-62 0.9409722222222222
CE8 742 1015 4.2e-51 0.9166666666666666
CE8 327 592 2.6e-25 0.9270833333333334

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395871 Pectinesterase 5.02e-44 1077 1374 3 296
Pectinesterase.
178051 PLN02432 1.19e-39 1076 1379 13 292
putative pectinesterase
178372 PLN02773 1.80e-37 1076 1373 7 296
pectinesterase
215357 PLN02665 3.13e-37 1782 2063 75 348
pectinesterase family protein
215179 PLN02314 9.47e-35 1076 1379 280 575
pectinesterase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 2541 1 2622
0.0 1 2541 1 2587
0.0 1 2541 1 2587
0.0 1 2541 1 2587
0.0 1 2541 1 2562

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.91e-40 1071 1380 6 296
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
7.21e-40 1071 1380 6 296
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
1.05e-26 1073 1379 6 308
Pectin methylesterase from Carrot [Daucus carota]
2.30e-24 1074 1379 3 304
Chain A, Pectinesterase 1 [Solanum lycopersicum]
1.21e-14 733 976 7 278
Chain A, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.25e-46 1070 1385 22 331
Pectinesterase OS=Aspergillus niger OX=5061 GN=pme1 PE=1 SV=1
1.44e-45 1071 1380 15 327
Pectinesterase OS=Aspergillus aculeatus OX=5053 GN=pme1 PE=2 SV=1
9.02e-40 1071 1380 34 324
Probable pectinesterase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pmeA PE=3 SV=1
3.85e-39 1431 1742 41 324
Probable pectinesterase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pmeA PE=3 SV=1
3.94e-39 1424 1742 37 325
Pectinesterase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pmeA PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000222 0.999759 CS pos: 19-20. Pr: 0.9765

TMHMM  Annotations      help

There is no transmembrane helices in FOIG_04527-t36_1-p1.