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CAZyme Information: FOC4_g10013858-t38_1-p1

You are here: Home > Sequence: FOC4_g10013858-t38_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Fusarium odoratissimum
Lineage Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium odoratissimum
CAZyme ID FOC4_g10013858-t38_1-p1
CAZy Family GT2|GT2
CAZyme Description Putative pectate lyase F
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
378 38522.13 4.0965
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Fodoratissimumrace4 14596 N/A 137 14459
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 4.2.2.2:6

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL3 168 350 1.3e-80 0.9639175257731959

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
397360 Pectate_lyase 1.77e-108 156 355 1 200
Pectate lyase.
197593 fCBD 1.52e-09 21 53 2 34
Fungal-type cellulose-binding domain. Small four-cysteine cellulose-binding domain of fungi
395595 CBM_1 2.15e-08 22 49 2 29
Fungal cellulose binding domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.47e-249 1 378 44 421
2.64e-184 1 378 1 375
2.10e-176 22 378 2 355
4.29e-176 1 378 1 375
4.90e-175 22 378 2 355

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.26e-30 172 317 11 149
Crystal Structure Of Pectate Lyase From Bacillus Sp. Strain Ksm-P15. [Bacillus sp. KSM-P15]
9.40e-24 205 335 35 176
Chain A, Endo-pectate lyase [Dickeya chrysanthemi],3B90_B Chain B, Endo-pectate lyase [Dickeya chrysanthemi]
7.68e-23 205 335 153 294
Chain A, Endo-pectate lyase [Dickeya chrysanthemi],3B4N_B Chain B, Endo-pectate lyase [Dickeya chrysanthemi],3B8Y_A Chain A, Endo-pectate lyase [Dickeya chrysanthemi],3B8Y_B Chain B, Endo-pectate lyase [Dickeya chrysanthemi]
2.99e-20 198 334 147 296
Chain A, Pectate lyase [Pectobacterium carotovorum],4U49_B Chain B, Pectate lyase [Pectobacterium carotovorum],4U4B_A Chain A, Pectate lyase [Pectobacterium carotovorum]
3.67e-19 204 298 46 139
The liganded structure of C. bescii family 3 pectate lyase [Caldicellulosiruptor bescii DSM 6725],4EW9_B The liganded structure of C. bescii family 3 pectate lyase [Caldicellulosiruptor bescii DSM 6725]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.14e-65 178 360 46 228
Probable pectate lyase F OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyF PE=3 SV=2
2.19e-62 178 360 46 229
Probable pectate lyase F OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyF PE=3 SV=1
4.36e-62 178 360 46 229
Probable pectate lyase F OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyF PE=3 SV=1
6.15e-62 178 360 46 229
Probable pectate lyase F OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyF PE=3 SV=1
8.68e-62 178 360 46 229
Probable pectate lyase F OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyF PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.002081 0.997915 CS pos: 17-18. Pr: 0.9623

TMHMM  Annotations      help

There is no transmembrane helices in FOC4_g10013858-t38_1-p1.