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CAZyme Information: FOC4_g10010896-t38_1-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Fusarium odoratissimum | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium odoratissimum | |||||||||||
| CAZyme ID | FOC4_g10010896-t38_1-p1 | |||||||||||
| CAZy Family | GH76 | |||||||||||
| CAZyme Description | Rhamnogalacturonase A | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 67 | 375 | 5.5e-49 | 0.9138461538461539 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 395231 | Glyco_hydro_28 | 2.32e-20 | 138 | 384 | 61 | 315 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| 177865 | PLN02218 | 1.07e-17 | 6 | 341 | 51 | 383 | polygalacturonase ADPG |
| 215426 | PLN02793 | 1.39e-17 | 40 | 377 | 57 | 414 | Probable polygalacturonase |
| 178580 | PLN03003 | 4.66e-17 | 37 | 339 | 25 | 330 | Probable polygalacturonase At3g15720 |
| 215540 | PLN03010 | 3.91e-16 | 37 | 391 | 48 | 396 | polygalacturonase |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 0.0 | 1 | 467 | 1 | 488 | |
| 0.0 | 1 | 467 | 1 | 488 | |
| 0.0 | 1 | 467 | 1 | 488 | |
| 0.0 | 1 | 467 | 1 | 488 | |
| 0.0 | 1 | 467 | 1 | 488 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.84e-103 | 18 | 445 | 1 | 404 | Rhamnogalacturonase A From Aspergillus Aculeatus [Aspergillus aculeatus] |
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| 3.65e-08 | 196 | 344 | 173 | 322 | Endo-Polygalacturonase Ii From Aspergillus Niger [Aspergillus niger],1CZF_B Endo-Polygalacturonase Ii From Aspergillus Niger [Aspergillus niger] |
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| 8.98e-08 | 110 | 335 | 92 | 332 | Chain A, POLYGALACTURONASE [Pectobacterium carotovorum] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.57e-104 | 13 | 455 | 14 | 431 | Probable rhamnogalacturonase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=rhgA PE=3 SV=1 |
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| 4.43e-104 | 13 | 455 | 14 | 431 | Rhamnogalacturonase A OS=Aspergillus niger OX=5061 GN=rhgA PE=1 SV=1 |
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| 5.84e-103 | 14 | 445 | 15 | 422 | Rhamnogalacturonase A OS=Aspergillus aculeatus OX=5053 GN=rhgA PE=1 SV=1 |
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| 4.84e-101 | 18 | 455 | 22 | 437 | Probable rhamnogalacturonase E OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=rhgE PE=3 SV=2 |
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| 6.74e-101 | 13 | 455 | 13 | 430 | Rhamnogalacturonase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=rhgA PE=2 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000249 | 0.999708 | CS pos: 17-18. Pr: 0.9728 |