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CAZyme Information: FOC4_g10009886-t38_1-p1

You are here: Home > Sequence: FOC4_g10009886-t38_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Fusarium odoratissimum
Lineage Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium odoratissimum
CAZyme ID FOC4_g10009886-t38_1-p1
CAZy Family GH5
CAZyme Description Putative endo-xylogalacturonan hydrolase A
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
331 35774.90 5.1870
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Fodoratissimumrace4 14596 N/A 137 14459
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.-:3

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 9 322 1.1e-59 0.8892307692307693

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395231 Glyco_hydro_28 2.57e-32 27 321 37 317
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
177865 PLN02218 3.62e-26 16 283 128 389
polygalacturonase ADPG
178580 PLN03003 5.82e-26 53 281 119 336
Probable polygalacturonase At3g15720
215120 PLN02188 2.15e-24 11 325 90 396
polygalacturonase/glycoside hydrolase family protein
215540 PLN03010 1.57e-23 12 283 105 355
polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.75e-244 1 331 76 406
1.15e-237 1 330 72 401
3.01e-206 1 306 72 377
3.01e-206 1 306 72 377
3.01e-206 1 306 72 377

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5.02e-105 2 330 58 384
Crystal structure of endo-xylogalacturonan hydrolase from Aspergillus tubingensis [Aspergillus tubingensis]
2.87e-24 4 328 40 344
Chain A, Endo-polygalacturonase [Evansstolkia leycettana]
3.53e-24 4 328 32 336
Chain A, Endo-polygalacturonase [Evansstolkia leycettana]
3.95e-24 4 328 40 344
Chain A, endo-polygalacturonase [Evansstolkia leycettana]
2.90e-18 34 237 66 254
Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_B Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_C Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_D Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_E Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_F Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_G Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.21e-104 2 330 76 402
Probable endo-xylogalacturonan hydrolase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=xghA PE=3 SV=1
4.55e-104 2 330 76 402
Endo-xylogalacturonan hydrolase A OS=Aspergillus tubingensis OX=5068 GN=xghA PE=1 SV=1
4.55e-104 2 330 76 402
Probable endo-xylogalacturonan hydrolase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=xghA PE=3 SV=1
7.32e-104 2 310 70 377
Probable endo-xylogalacturonan hydrolase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=xghA PE=3 SV=1
1.83e-103 2 330 76 402
Probable endo-xylogalacturonan hydrolase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=xghA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.997175 0.002849

TMHMM  Annotations      help

There is no transmembrane helices in FOC4_g10009886-t38_1-p1.