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CAZyme Information: FOC4_g10006766-t38_1-p1

You are here: Home > Sequence: FOC4_g10006766-t38_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Fusarium odoratissimum
Lineage Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium odoratissimum
CAZyme ID FOC4_g10006766-t38_1-p1
CAZy Family GH27
CAZyme Description AP-1 complex subunit gamma-1
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1440 159653.57 6.3904
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Fodoratissimumrace4 14596 N/A 137 14459
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.113:7

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH47 104 606 7.3e-164 0.9932735426008968

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
396217 Glyco_hydro_47 0.0 104 607 2 453
Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2).
396262 Adaptin_N 5.52e-151 651 1193 1 520
Adaptin N terminal region. This family consists of the N terminal region of various alpha, beta and gamma subunits of the AP-1, AP-2 and AP-3 adaptor protein complexes. The adaptor protein (AP) complexes are involved in the formation of clathrin-coated pits and vesicles. The N-terminal region of the various adaptor proteins (APs) is constant by comparison to the C-terminal which is variable within members of the AP-2 family; and it has been proposed that this constant region interacts with another uniform component of the coated vesicles.
240427 PTZ00470 5.73e-122 91 611 67 522
glycoside hydrolase family 47 protein; Provisional
197886 Alpha_adaptinC2 1.06e-24 1336 1437 2 102
Adaptin C-terminal domain. Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. Gamma-adaptin is a subunit of the golgi adaptor. Alpha adaptin is a heterotetramer that regulates clathrin-bud formation. The carboxyl-terminal appendage of the alpha subunit regulates translocation of endocytic accessory proteins to the bud site. This Ig-fold domain is found in alpha, beta and gamma adaptins and consists of a beta-sandwich containing 7 strands in 2 beta-sheets in a greek-key topology.. The adaptor appendage contains an additional N-terminal strand.
397151 Alpha_adaptinC2 3.66e-20 1336 1435 6 108
Adaptin C-terminal domain. Alpha adaptin is a heterotetramer which regulates clathrin-bud formation. The carboxyl-terminal appendage of the alpha subunit regulates translocation of endocytic accessory proteins to the bud site. This ig-fold domain is found in alpha, beta and gamma adaptins.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 1439 1 1429
0.0 5 1438 4 1469
0.0 1 610 1 610
0.0 1 610 1 610
0.0 1 610 1 610

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.48e-190 635 1207 4 583
Structure of the cargo bound AP-1:Arf1:tetherin-Nef stable closed trimer [Mus musculus],6CRI_Q Structure of the cargo bound AP-1:Arf1:tetherin-Nef stable closed trimer [Mus musculus],6CRI_R Structure of the cargo bound AP-1:Arf1:tetherin-Nef stable closed trimer [Mus musculus]
2.55e-190 635 1207 7 586
Structural basis for recruitment and activation of the AP-1 clathrin adaptor complex by Arf1 [Mus musculus],6CM9_G Structure of the cargo bound AP-1:Arf1:tetherin-Nef closed trimer monomeric subunit [Mus musculus],6D83_G Structure of the cargo bound AP-1:Arf1:tetherin-Nef (L164A, L165A) dileucine mutant dimer monomeric subunit [Mus musculus],6D84_G Structure of the cargo bound AP-1:Arf1:tetherin-Nef (L164A, L165A) dileucine mutant dimer [Mus musculus],6D84_K Structure of the cargo bound AP-1:Arf1:tetherin-Nef (L164A, L165A) dileucine mutant dimer [Mus musculus],6DFF_G Structure of the cargo bound AP-1:Arf1:tetherin-Nef monomer [Mus musculus]
4.37e-190 623 1207 11 600
Crystal structure of the human BST2 cytoplasmic domain and the HIV-1 Vpu cytoplasmic domain bound to the clathrin adaptor protein complex 1 (AP1) core [Mus musculus]
4.53e-190 635 1207 12 591
AP1 clathrin adaptor core [Mus musculus],1W63_C AP1 clathrin adaptor core [Mus musculus],1W63_E AP1 clathrin adaptor core [Mus musculus],1W63_G AP1 clathrin adaptor core [Mus musculus],1W63_I AP1 clathrin adaptor core [Mus musculus],1W63_K AP1 clathrin adaptor core [Mus musculus]
3.88e-67 623 1224 11 634
HIV-1 Nef in complex with the CD4 cytoplasmic domain and the AP2 clathrin adaptor complex [Rattus norvegicus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.11e-241 635 1440 30 873
AP-1 complex subunit gamma-1 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=APL4 PE=3 SV=3
1.08e-201 635 1422 5 876
AP-1 complex subunit gamma OS=Dictyostelium discoideum OX=44689 GN=ap1g1 PE=1 SV=1
3.63e-195 635 1435 7 814
AP-1 complex subunit gamma-1 OS=Homo sapiens OX=9606 GN=AP1G1 PE=1 SV=5
5.47e-194 635 1435 7 814
AP-1 complex subunit gamma-1 OS=Mus musculus OX=10090 GN=Ap1g1 PE=1 SV=3
4.17e-193 635 1435 7 814
AP-1 complex subunit gamma-1 OS=Pongo abelii OX=9601 GN=AP1G1 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.999984 0.000037

TMHMM  Annotations      download full data without filtering help

Start End
7 26