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CAZyme Information: FOC4_g10005933-t38_1-p1

You are here: Home > Sequence: FOC4_g10005933-t38_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Fusarium odoratissimum
Lineage Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium odoratissimum
CAZyme ID FOC4_g10005933-t38_1-p1
CAZy Family GH18
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
665 KB726570|CGC7 75621.92 5.3492
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Fodoratissimumrace4 14596 N/A 137 14459
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in FOC4_g10005933-t38_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH142 20 492 1.8e-180 0.9582463465553236

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395611 F5_F8_type_C 1.89e-04 525 657 1 125
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 665 1 665
0.0 3 662 13 673
0.0 3 662 13 673
0.0 3 662 13 673
0.0 3 664 2 657

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.60e-99 25 493 653 1098
Sialidase BT_1020 [Bacteroides thetaiotaomicron]
2.45e-96 25 493 653 1098
Sialidase BT_1020 [Bacteroides thetaiotaomicron]
1.27e-19 25 486 305 799
Crystal structure of GH121 beta-L-arabinobiosidase HypBA2 from Bifidobacterium longum [Bifidobacterium longum]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.02e-26 25 663 336 1049
Beta-L-arabinobiosidase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=hypBA2 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000055 0.000001

TMHMM  Annotations      help

There is no transmembrane helices in FOC4_g10005933-t38_1-p1.