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CAZyme Information: FOC4_g10003934-t38_1-p1

You are here: Home > Sequence: FOC4_g10003934-t38_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Fusarium odoratissimum
Lineage Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium odoratissimum
CAZyme ID FOC4_g10003934-t38_1-p1
CAZy Family CE5
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
403 45336.06 4.9014
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Fodoratissimumrace4 14596 N/A 137 14459
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in FOC4_g10003934-t38_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 145 369 8.4e-32 0.6338461538461538

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
227721 Pgu1 6.23e-05 187 233 288 338
Polygalacturonase [Carbohydrate transport and metabolism].
395231 Glyco_hydro_28 0.007 187 368 139 305
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.25e-276 1 403 1 484
6.11e-258 1 401 1 482
6.11e-258 1 401 1 482
6.11e-258 1 401 1 482
5.00e-257 1 401 1 482

PDB Hits      help

FOC4_g10003934-t38_1-p1 has no PDB hit.

Swiss-Prot Hits      help

FOC4_g10003934-t38_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000263 0.999721 CS pos: 23-24. Pr: 0.9786

TMHMM  Annotations      help

There is no transmembrane helices in FOC4_g10003934-t38_1-p1.