CAZyme Information: FOC4_g10002194-t38_1-p1

Basic Information

• Species: Fusarium odoratissimum
• Lineage: Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium odoratissimum
• CAZyme ID: FOC4_g10002194-t38_1-p1
• CAZy Family: AA7
• CAZyme Description: Choline dehydrogenase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
481		51780.32	5.8669

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_Fodoratissimumrace4	14596	N/A	137	14459

• Gene Location: location=KB726227:390007-391452(-)

Full Sequence      

MRKYFVRLEDNNYLLPGKPGHGYNGWLSTETAPLSIALQDPQLLSLITGGAFALGNLTDN
IINVATLLAGDANADTDGRDAKGGFFQAPIHSKNGVRVGPREFILAVRDAKDSKGNKKYP
LDVRMNCHVTKVVFDESEDPPRATGVEFLDGRGIYKASPLSRSAGAGKPGSATASREVIV
AGGTYNSPQILKLSGIGPADELKKFNIPVISDLPGVGTNLQDHYEIVVQSRIPKNFSALH
GCTFDGGPDDKCLDQWQKPLLGLTANKGTYTSSGLPVAMLYKSTAADRGDWDIFAFGGPV
NFRGYFPNYSYNATAEHDIFSWAILKGQPRNHAGTVTLKSDDPLDVPEIVYNYFDTGDDG
YEKDIQALAEAVDLTRDAFGRQIIPTKEVLPGASVSTKGEVEDYIKNTAWGHHASCTCPI
GAADDEMAVLDSKFRVRGVKGLRVVDASVYPRIPGTFTAVSTFIVAEKAADDILSGLSRL
S

Enzyme Prediction     

No EC number prediction in FOC4_g10002194-t38_1-p1.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
AA3	64	474	2.4e-72	0.6936619718309859

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
235000	PRK02106	2.26e-70	121	474	216	532	choline dehydrogenase; Validated
225186	BetA	1.03e-49	4	475	126	535	Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
398739	GMC_oxred_C	2.21e-31	334	469	5	143	GMC oxidoreductase. This domain found associated with pfam00732.
215420	PLN02785	1.66e-17	121	456	235	559	Protein HOTHEAD
366272	GMC_oxred_N	9.35e-14	121	225	142	218	GMC oxidoreductase. This family of proteins bind FAD as a cofactor.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QKD57933.1|AA3	0.0	1	481	169	649
UPK92349.1|AA3	0.0	1	478	169	646
QMW33146.1|AA3	1.11e-242	1	478	169	646
QRD84722.1|AA3	1.11e-242	1	478	169	646
QMW45179.1|AA3	1.11e-242	1	478	169	646

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6YS2_AAA	2.85e-33	121	470	214	557	Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis]
6ZH7_A	3.87e-33	121	470	214	557	Chain A, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis],6ZH7_B Chain B, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis]
6YRU_AAA	3.87e-33	121	470	214	557	Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRV_AAA Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRX_AAA Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRZ_AAA Chain AAA, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis]
6YS1_AAA	3.87e-33	121	470	214	557	Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis]
5NCC_A	4.35e-33	121	470	230	573	Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_B Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_C Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_D Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_E Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_F Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|Q7MF12|BETA_VIBVY	1.64e-40	89	474	186	531	Oxygen-dependent choline dehydrogenase OS=Vibrio vulnificus (strain YJ016) OX=196600 GN=betA PE=3 SV=1
sp|Q8D3K2|BETA_VIBVU	1.10e-39	89	474	186	531	Oxygen-dependent choline dehydrogenase OS=Vibrio vulnificus (strain CMCP6) OX=216895 GN=betA PE=3 SV=1
sp|B1JSR0|BETA_YERPY	2.82e-38	142	473	231	531	Oxygen-dependent choline dehydrogenase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) OX=502800 GN=betA PE=3 SV=1
sp|A7FKL6|BETA_YERP3	2.82e-38	142	473	231	531	Oxygen-dependent choline dehydrogenase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) OX=349747 GN=betA PE=3 SV=1
sp|B2K8U4|BETA_YERPB	2.82e-38	142	473	231	531	Oxygen-dependent choline dehydrogenase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) OX=502801 GN=betA PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	CS Position
0.999700	0.000294

TMHMM  Annotations     

There is no transmembrane helices in FOC4_g10002194-t38_1-p1.