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CAZyme Information: FOC1_g10006977-t38_1-p1

You are here: Home > Sequence: FOC1_g10006977-t38_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Fusarium oxysporum
Lineage Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium oxysporum
CAZyme ID FOC1_g10006977-t38_1-p1
CAZy Family GH28
CAZyme Description Putative pectinesterase A
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
300 KB730325|CGC1 32716.32 8.1924
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Foxysporumrace1 15626 1229664 188 15438
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.1.1.11:3

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 47 219 9.9e-47 0.5798611111111112

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
215367 PLN02682 1.11e-27 28 219 56 252
pectinesterase family protein
178051 PLN02432 5.26e-27 40 214 8 172
putative pectinesterase
215357 PLN02665 5.37e-26 40 204 63 228
pectinesterase family protein
215173 PLN02304 4.09e-25 45 203 77 235
probable pectinesterase
395871 Pectinesterase 8.68e-25 45 222 2 175
Pectinesterase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.09e-165 1 300 1 335
7.65e-137 1 300 1 323
7.65e-137 1 300 1 323
7.65e-137 1 300 1 323
7.65e-137 1 300 1 323

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7.76e-60 36 300 2 299
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
1.10e-59 36 300 2 299
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
2.26e-14 56 220 43 224
Pectin methylesterase from Yersinia enterocolitica [Yersinia enterocolitica subsp. enterocolitica 8081]
1.42e-13 36 282 2 293
Pectin methylesterase from Carrot [Daucus carota]
3.66e-11 46 223 7 200
Chain A, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.65e-64 9 300 2 324
Probable pectinesterase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pmeA PE=3 SV=1
1.65e-64 9 300 2 324
Probable pectinesterase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pmeA PE=3 SV=1
4.65e-64 26 300 17 324
Probable pectinesterase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pmeA PE=3 SV=1
5.99e-62 37 300 29 325
Pectinesterase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pmeA PE=1 SV=1
1.83e-60 22 300 14 324
Probable pectinesterase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pmeA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000222 0.999771 CS pos: 26-27. Pr: 0.9544

TMHMM  Annotations      help

There is no transmembrane helices in FOC1_g10006977-t38_1-p1.