logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: FOC1_g10006401-t38_1-p1

You are here: Home > Sequence: FOC1_g10006401-t38_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Fusarium oxysporum
Lineage Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium oxysporum
CAZyme ID FOC1_g10006401-t38_1-p1
CAZy Family GH18
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1052 KB731258|CGC6 117274.70 6.3891
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Foxysporumrace1 15626 1229664 188 15438
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.40:2

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH106 16 438 7.8e-28 0.42475728155339804

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
213391 fungal_TF_MHR 2.25e-22 554 930 1 399
fungal transcription factor regulatory middle homology region. This domain is present in the large family of fungal zinc cluster transcription factors that contain an N-terminal GAL4-like C6 zinc binuclear cluster DNA-binding domain. Examples of members of this large fungal group are the following Saccharomyces cerevisiae transcription factors, GAL4, STB5, DAL81, CAT8, RDR1, HAL9, PUT3, PPR1, ASG1, RSF2, PIP2, as well as the C-terminal domain of the Cep3, a subunit of the yeast centromere-binding factor 3. It has been suggested that this region plays a regulatory role.
397964 Fungal_trans 1.24e-08 564 732 2 177
Fungal specific transcription factor domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
4.37e-165 2 440 36 458
3.61e-159 2 467 31 483
4.72e-159 2 440 36 458
1.29e-157 2 440 30 453
1.43e-140 18 440 16 424

PDB Hits      help

FOC1_g10006401-t38_1-p1 has no PDB hit.

Swiss-Prot Hits      help

FOC1_g10006401-t38_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000072 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in FOC1_g10006401-t38_1-p1.