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CAZyme Information: FOC1_g10006165-t38_1-p1

You are here: Home > Sequence: FOC1_g10006165-t38_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Fusarium oxysporum
Lineage Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium oxysporum
CAZyme ID FOC1_g10006165-t38_1-p1
CAZy Family GH18
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
379 41338.51 7.0957
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Foxysporumrace1 15626 1229664 188 15438
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.-:5

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH93 49 351 3.6e-112 0.9739413680781759

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
271234 Sialidase_non-viral 4.73e-05 54 262 148 335
Non-viral sialidases. Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates, they play vital roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial and eukaryotic sialidases.
271234 Sialidase_non-viral 0.002 67 270 101 287
Non-viral sialidases. Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates, they play vital roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial and eukaryotic sialidases.
214740 VPS10 0.004 87 159 302 390
VPS10 domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.19e-283 1 379 1 379
9.14e-283 1 379 1 379
1.84e-282 1 379 1 379
3.72e-282 1 379 1 379
1.07e-281 1 378 1 378

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.90e-125 39 378 16 364
Chain A, Alpha-l-arabinofuranosidase [Fusarium graminearum]
1.90e-125 39 378 16 364
Chain A, Exo-1,5-alpha-l-arabinofuranobiosidase [Fusarium graminearum],5M1Z_A Chain A, Exo-1,5-alpha-L-arabinofuranobiosidase [Fusarium graminearum]
1.54e-124 39 378 16 364
Chain A, Exo-1,5-alpha-l-arabinofuranobiosidase [Fusarium graminearum],2YDP_B Chain B, Exo-1,5-alpha-l-arabinofuranobiosidase [Fusarium graminearum],2YDP_C Chain C, Exo-1,5-alpha-l-arabinofuranobiosidase [Fusarium graminearum]
8.31e-124 33 366 5 341
High resolution structure of Penicillium chrysogenum alpha-L-arabinanase [Penicillium chrysogenum],3A72_A High resolution structure of Penicillium chrysogenum alpha-L-arabinanase complexed with arabinobiose [Penicillium chrysogenum]
1.01e-122 39 378 16 364
Chain A, ALPHA-L-ARABINOFURANOSIDASE [Fusarium graminearum]

Swiss-Prot Hits      help

FOC1_g10006165-t38_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000763 0.999228 CS pos: 21-22. Pr: 0.6479

TMHMM  Annotations      help

There is no transmembrane helices in FOC1_g10006165-t38_1-p1.