logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: FOC1_g10005625-t38_1-p1

You are here: Home > Sequence: FOC1_g10005625-t38_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Fusarium oxysporum
Lineage Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium oxysporum
CAZyme ID FOC1_g10005625-t38_1-p1
CAZy Family GH16
CAZyme Description Putative endoglucanase type F
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
384 KB730516|CGC4 41167.44 6.8865
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Foxysporumrace1 15626 1229664 188 15438
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.8:45

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH10 84 383 1.1e-104 0.9933993399339934
CBM1 22 49 9.4e-16 0.9310344827586207

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395262 Glyco_hydro_10 3.05e-144 84 382 1 310
Glycosyl hydrolase family 10.
214750 Glyco_10 3.12e-114 127 380 1 263
Glycosyl hydrolase family 10.
226217 XynA 2.53e-62 79 381 19 338
Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism].
197593 fCBD 3.23e-16 20 53 1 34
Fungal-type cellulose-binding domain. Small four-cysteine cellulose-binding domain of fungi
395595 CBM_1 6.07e-15 22 49 2 29
Fungal cellulose binding domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.62e-274 1 384 1 384
4.65e-274 1 384 1 384
9.33e-272 1 384 1 385
5.56e-250 1 384 1 384
5.56e-250 1 384 1 384

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.30e-201 1 384 1 396
Crystal structure of Endo-1,4-beta-xylanase-like protein from Acremonium chrysogenum [Acremonium chrysogenum ATCC 11550],5MRJ_B Crystal structure of Endo-1,4-beta-xylanase-like protein from Acremonium chrysogenum [Acremonium chrysogenum ATCC 11550]
2.77e-135 84 384 6 302
XYLANASE FROM PENICILLIUM SIMPLICISSIMUM, COMPLEX WITH 1,2-(4-DEOXY-BETA-L-THREO-HEX-4-ENOPYRANOSYLURONIC ACID)-BETA-1,4-XYLOTRIOSE) [Penicillium simplicissimum],1B31_A XYLANASE FROM PENICILLIUM SIMPLICISSIMUM, NATIVE WITH PEG200 AS CRYOPROTECTANT [Penicillium simplicissimum],1B3V_A XYLANASE FROM PENICILLIUM SIMPLICISSIMUM, COMPLEX WITH XYLOSE [Penicillium simplicissimum],1B3W_A XYLANASE FROM PENICILLIUM SIMPLICISSIMUM, COMPLEX WITH XYLOBIOSE [Penicillium simplicissimum],1B3X_A XYLANASE FROM PENICILLIUM SIMPLICISSIMUM, COMPLEX WITH XYLOTRIOSE [Penicillium simplicissimum],1B3Y_A XYLANASE FROM PENICILLIUM SIMPLICISSIMUM, COMPLEX WITH XYLOTETRAOSE [Penicillium simplicissimum],1B3Z_A XYLANASE FROM PENICILLIUM SIMPLICISSIMUM, COMPLEX WITH XYLOPENTAOSE [Penicillium simplicissimum],1BG4_A XYLANASE FROM PENICILLIUM SIMPLICISSIMUM [Penicillium simplicissimum]
6.43e-134 84 384 6 302
Crystal structure of an endo-beta-1,4-xylanase (glycoside hydrolase family 10/GH10) enzyme from Aspergillus niger [Aspergillus niger CBS 513.88],4XUY_B Crystal structure of an endo-beta-1,4-xylanase (glycoside hydrolase family 10/GH10) enzyme from Aspergillus niger [Aspergillus niger CBS 513.88]
7.30e-126 84 384 5 302
Crystal Structure of xylanase (GH10) in complex with inhibitor (XIP) [Aspergillus nidulans]
2.39e-124 84 384 6 301
The xylanase TA from Thermoascus aurantiacus utilizes arabinose decorations of xylan as significant substrate specificity determinants. [Thermoascus aurantiacus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.66e-272 1 384 1 385
Putative endoglucanase type F OS=Fusarium oxysporum OX=5507 PE=2 SV=1
8.60e-212 1 384 1 380
Endo-1,4-beta-xylanase D OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=XYLD PE=1 SV=1
1.07e-207 1 384 1 380
Endo-1,4-beta-xylanase 6 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=XYL6 PE=3 SV=1
1.07e-207 1 384 1 380
Endo-1,4-beta-xylanase 6 OS=Magnaporthe grisea OX=148305 GN=XYL6 PE=1 SV=1
2.31e-136 82 384 27 314
Probable endo-1,4-beta-xylanase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=xlnC PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000215 0.999770 CS pos: 17-18. Pr: 0.9729

TMHMM  Annotations      help

There is no transmembrane helices in FOC1_g10005625-t38_1-p1.