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CAZyme Information: FOC1_g10004978-t38_1-p1

You are here: Home > Sequence: FOC1_g10004978-t38_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Fusarium oxysporum
Lineage Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium oxysporum
CAZyme ID FOC1_g10004978-t38_1-p1
CAZy Family GH15|CBM20
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
485 52222.64 6.6297
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Foxysporumrace1 15626 1229664 188 15438
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.8:3 3.2.1.-:3

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH30 36 481 2.2e-183 0.9887133182844243

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
227807 XynC 1.99e-23 20 484 14 429
O-Glycosyl hydrolase [Cell wall/membrane/envelope biogenesis].
396577 Glyco_hydro_59 9.48e-10 77 355 27 256
Glycosyl hydrolase family 59.
405300 Glyco_hydr_30_2 3.41e-08 34 353 1 354
O-Glycosyl hydrolase family 30.
407314 Glyco_hydro_30C 1.81e-06 391 446 1 57
Glycosyl hydrolase family 30 beta sandwich domain.
307945 Glyco_hydro_30 2.20e-05 50 216 3 158
Glycosyl hydrolase family 30 TIM-barrel domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 485 1 485
0.0 1 485 1 485
0.0 1 485 1 485
0.0 1 485 1 485
0.0 1 485 1 485

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5.44e-191 23 484 11 472
Chain A, GH30 Xylanase B [Talaromyces cellulolyticus CF-2612],6IUJ_B Chain B, GH30 Xylanase B [Talaromyces cellulolyticus CF-2612]
6.36e-190 34 484 92 543
Crystal structure of GH30 xylanase B from Talaromyces cellulolyticus expressed by Pichia pastoris [Saccharomyces uvarum],6KRN_A Crystal structure of GH30 xylanase B from Talaromyces cellulolyticus expressed by Pichia pastoris in complex with aldotriuronic acid [Saccharomyces uvarum]
1.71e-122 37 482 5 446
Chain A, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464],7O0E_G Chain G, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464]
3.53e-121 37 482 12 453
Chain AAA, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464]
8.82e-100 24 482 12 452
Chain A, GH30 Xylanase C [Talaromyces cellulolyticus CF-2612],6M5Z_B Chain B, GH30 Xylanase C [Talaromyces cellulolyticus CF-2612]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.22e-122 11 482 5 470
GH30 family xylanase OS=Myceliophthora thermophila (strain ATCC 42464 / BCRC 31852 / DSM 1799) OX=573729 GN=Xyn30A PE=1 SV=1
1.96e-09 134 482 98 420
Glucuronoxylanase XynC OS=Bacillus subtilis OX=1423 GN=xynC PE=3 SV=2
1.73e-08 149 434 193 493
Putative glucosylceramidase 1 OS=Caenorhabditis elegans OX=6239 GN=gba-1 PE=1 SV=2
1.80e-07 134 484 97 421
Glucuronoxylanase XynC OS=Bacillus subtilis (strain 168) OX=224308 GN=xynC PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.001086 0.998892 CS pos: 15-16. Pr: 0.3523

TMHMM  Annotations      help

There is no transmembrane helices in FOC1_g10004978-t38_1-p1.