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CAZyme Information: FOC1_g10004266-t38_1-p1

You are here: Home > Sequence: FOC1_g10004266-t38_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Fusarium oxysporum
Lineage Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium oxysporum
CAZyme ID FOC1_g10004266-t38_1-p1
CAZy Family GH1
CAZyme Description Putative alpha-galactosidase D
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
537 KB730877|CGC3 59327.68 4.7408
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Foxysporumrace1 15626 1229664 188 15438
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.22:1 3.2.1.88:1 3.2.1.22:1 3.2.1.88:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH27 122 364 1.9e-67 0.9650655021834061

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
269893 GH27 3.85e-113 23 298 1 271
glycosyl hydrolase family 27 (GH27). GH27 enzymes occur in eukaryotes, prokaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-N-acetylgalactosaminidase, and 3-alpha-isomalto-dextranase. All GH27 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. GH27 members are retaining enzymes that cleave their substrates via an acid/base-catalyzed, double-displacement mechanism involving a covalent glycosyl-enzyme intermediate. Two aspartic acid residues have been identified as the catalytic nucleophile and the acid/base, respectively.
177874 PLN02229 7.87e-90 22 388 62 421
alpha-galactosidase
178295 PLN02692 1.34e-88 22 364 55 386
alpha-galactosidase
166449 PLN02808 6.08e-87 22 385 31 384
alpha-galactosidase
374582 Melibiase_2 5.55e-65 22 298 1 284
Alpha galactosidase A.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 537 29 568
0.0 1 537 1 540
0.0 1 536 1 542
0.0 1 536 25 566
0.0 1 536 25 566

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
8.46e-81 22 385 8 360
Chain A, alpha-galactosidase [Oryza sativa]
5.95e-69 22 385 8 361
Nicotiana benthamiana alpha-galactosidase [Nicotiana benthamiana]
8.88e-67 22 391 8 397
Crystal structure of alpha-galactosidase I from Mortierella vinacea [Umbelopsis vinacea]
1.17e-56 22 333 99 419
Crystal structure of a putative alpha-galactosidase/melibiase (BF4189) from Bacteroides fragilis NCTC 9343 at 2.00 A resolution [Bacteroides fragilis NCTC 9343],4OGZ_B Crystal structure of a putative alpha-galactosidase/melibiase (BF4189) from Bacteroides fragilis NCTC 9343 at 2.00 A resolution [Bacteroides fragilis NCTC 9343]
1.31e-52 22 341 99 427
Crystal structure of a putative alpha-galactosidase (BF1418) from Bacteroides fragilis NCTC 9343 at 1.57 A resolution [Bacteroides fragilis NCTC 9343]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.23e-124 22 537 32 659
Alpha-galactosidase D OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=aglD PE=1 SV=2
1.93e-120 22 537 30 648
Probable alpha-galactosidase D OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=aglD PE=3 SV=2
1.93e-120 22 537 30 648
Probable alpha-galactosidase D OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=aglD PE=3 SV=2
2.37e-118 22 537 30 648
Probable alpha-galactosidase D OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=aglD PE=3 SV=1
6.59e-113 22 536 31 655
Probable alpha-galactosidase D OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=aglD PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000334 0.999650 CS pos: 15-16. Pr: 0.9784

TMHMM  Annotations      help

There is no transmembrane helices in FOC1_g10004266-t38_1-p1.