logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: FOC1_g10004253-t38_1-p1

You are here: Home > Sequence: FOC1_g10004253-t38_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Fusarium oxysporum
Lineage Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium oxysporum
CAZyme ID FOC1_g10004253-t38_1-p1
CAZy Family GH1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
515 KB730877|CGC2 57703.51 7.6270
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Foxysporumrace1 15626 1229664 188 15438
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.71:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH162 32 513 4e-199 0.9958677685950413

CDD Domains      help

FOC1_g10004253-t38_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 515 1 506
0.0 6 515 4 523
0.0 6 515 4 523
0.0 6 515 4 523
0.0 6 515 4 523

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.40e-229 31 513 13 504
The apo-structure of endo-beta-1,2-glucanase from Talaromyces funiculosus [Talaromyces funiculosus],6IMU_B The apo-structure of endo-beta-1,2-glucanase from Talaromyces funiculosus [Talaromyces funiculosus],6IMV_A The complex structure of endo-beta-1,2-glucanase from Talaromyces funiculosus with sophorose [Talaromyces funiculosus],6IMV_B The complex structure of endo-beta-1,2-glucanase from Talaromyces funiculosus with sophorose [Talaromyces funiculosus]
9.71e-229 31 513 13 504
The complex structure of endo-beta-1,2-glucanase mutant (E262Q) from Talaromyces funiculosus with beta-1,2-glucan [Talaromyces funiculosus],6IMW_B The complex structure of endo-beta-1,2-glucanase mutant (E262Q) from Talaromyces funiculosus with beta-1,2-glucan [Talaromyces funiculosus]

Swiss-Prot Hits      help

FOC1_g10004253-t38_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000186 0.999775 CS pos: 21-22. Pr: 0.9732

TMHMM  Annotations      help

There is no transmembrane helices in FOC1_g10004253-t38_1-p1.