CAZyme Information: FOC1_g10004196-t38_1-p1

Basic Information

• Species: Fusarium oxysporum
• Lineage: Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium oxysporum
• CAZyme ID: FOC1_g10004196-t38_1-p1
• CAZy Family: CE8
• CAZyme Description: Choline dehydrogenase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
646		70066.26	5.0064

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_Foxysporumrace1	15626	1229664	188	15438

• Gene Location: location=KB730877:3467-5458(-)

Full Sequence      

MRCNVLSPSLLALSLSTSVTARPEIPFISTLLDPLQHIVKSAYAGDGLGVDAEYDYVVVG
GGTAGNTIGYRLAKAGYSVAIVEAGPFLEISKPILATSPGGVTAGSGASLLDSNPLRDWR
FTTTAQTGADDREIHYARGKVLGGSSQLNFLVYHRPTNGTMAKWAEDVGDDSYTWEQMLP
HFQKSPSFTPPDNEKRNVTTDYDASAFSKEKGPLQISYANYVPSWAVLVEKGLKSLGFKG
IDGFSSGSLLGYSYTTTTVQPKTATRSASDDFVKTARSEKLKTLKVYTESLAKKVTFDDD
KKATGVEVSSVGIDYTLKAKKEVIVSGGAFQSPQVLMVSGVGPKQHLEELDIPVVADLPG
VGQNLWDHVLFGPSFEVQGLEDTLSAAINNDTVFQGALDAYAQQQAGPLTSNQVELLGWE
KAPEKYRSKFSAETIKDLATFPDDWPEMEIIPLNVYSEDWSFPILQQPTDGKKYTSLNGA
LVAPLSRGNITLRTNSTTDAPLINPNFLTKKADQEVAIALFRRLREIAKSTPLKDTVLKE
VYPGEQHETDEQILAVLRDTLMTVWHAACTCKMGKKDDEMAVLDSKARVYGVKGLRVVDA
SAFPLLIPGHPVGTVYALAEKIAHDIITEEKSEGSAYKVDIDVEVS

Enzyme Prediction     

No EC number prediction in FOC1_g10004196-t38_1-p1.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
AA3	53	627	4.8e-176	0.9929577464788732

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
225186	BetA	2.96e-97	50	636	4	542	Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
235000	PRK02106	1.49e-93	53	627	5	531	choline dehydrogenase; Validated
398739	GMC_oxred_C	3.72e-40	484	622	1	143	GMC oxidoreductase. This domain found associated with pfam00732.
215420	PLN02785	1.72e-28	49	603	51	553	Protein HOTHEAD
366272	GMC_oxred_N	1.30e-24	129	368	14	216	GMC oxidoreductase. This family of proteins bind FAD as a cofactor.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QKD61619.1|AA3_2	0.0	1	646	1	658
QPC62877.1|AA3_2	0.0	1	643	1	655
CZS85865.1|AA3_2	0.0	1	643	1	655
CEF88560.1|AA3_2	0.0	1	643	1	655
QPC80243.1|AA3_2	0.0	1	643	1	655

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5OC1_A	2.50e-58	53	631	1	565	Crystal structure of aryl-alcohol oxidase from Pleurotus eryngii in complex with p-anisic acid [Pleurotus eryngii]
3FIM_B	3.53e-58	52	631	1	566	Crystal structure of aryl-alcohol-oxidase from Pleurotus eryingii [Pleurotus eryngii]
6ZE2_A	5.28e-55	50	635	2	591	Chain A, FAD-dependent oxidoreductase [Thermochaetoides thermophila DSM 1495],6ZE2_B Chain B, FAD-dependent oxidoreductase [Thermochaetoides thermophila DSM 1495],6ZE3_A Chain A, FAD-dependent oxidoreductase [Thermochaetoides thermophila DSM 1495],6ZE4_A Chain A, FAD-dependent oxidoreductase [Thermochaetoides thermophila DSM 1495],6ZE4_B Chain B, FAD-dependent oxidoreductase [Thermochaetoides thermophila DSM 1495],6ZE5_A Chain A, FAD-dependent oxidoreductase [Thermochaetoides thermophila DSM 1495],6ZE5_B Chain B, FAD-dependent oxidoreductase [Thermochaetoides thermophila DSM 1495],6ZE6_A Chain A, FAD-dependent oxidoreductase [Thermochaetoides thermophila DSM 1495],6ZE6_B Chain B, FAD-dependent oxidoreductase [Thermochaetoides thermophila DSM 1495],6ZE7_A Chain A, FAD-dependent oxidoreductase [Thermochaetoides thermophila DSM 1495],6ZE7_B Chain B, FAD-dependent oxidoreductase [Thermochaetoides thermophila DSM 1495],7AA2_A Chain A, FAD-dependent oxidoreductase [Thermochaetoides thermophila DSM 1495],7AA2_B Chain B, FAD-dependent oxidoreductase [Thermochaetoides thermophila DSM 1495]
3Q9T_A	1.82e-53	52	631	5	574	Crystal structure analysis of formate oxidase [Aspergillus oryzae RIB40],3Q9T_B Crystal structure analysis of formate oxidase [Aspergillus oryzae RIB40],3Q9T_C Crystal structure analysis of formate oxidase [Aspergillus oryzae RIB40]
5ZU3_A	2.50e-53	52	631	5	574	Effect of mutation (R554K) on FAD modification in Aspergillus oryzae RIB40formate oxidase [Aspergillus oryzae RIB40],5ZU3_B Effect of mutation (R554K) on FAD modification in Aspergillus oryzae RIB40formate oxidase [Aspergillus oryzae RIB40],5ZU3_C Effect of mutation (R554K) on FAD modification in Aspergillus oryzae RIB40formate oxidase [Aspergillus oryzae RIB40]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|A1CFL2|PATE_ASPCL	8.40e-155	8	626	5	624	Patulin synthase OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=patE PE=1 SV=1
sp|A0A075TRK9|PATE_PENEN	1.33e-153	47	626	45	624	Patulin synthase OS=Penicillium expansum OX=27334 GN=patE PE=1 SV=1
sp|A0A1U8QYA8|CICC_EMENI	8.81e-153	49	629	31	610	Oxidoreductase cicC OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=cicC PE=1 SV=1
sp|M2Y151|VBSA_DOTSN	5.26e-143	54	627	76	644	Versicolorin B synthase OS=Dothistroma septosporum (strain NZE10 / CBS 128990) OX=675120 GN=vbsA PE=2 SV=1
sp|A4UHS8|VBSA_DOTSE	5.26e-143	54	627	76	644	Versicolorin B synthase OS=Dothistroma septosporum OX=64363 GN=vbsA PE=2 SV=2

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.126621	0.873373	CS pos: 21-22. Pr: 0.8295

TMHMM  Annotations     

There is no transmembrane helices in FOC1_g10004196-t38_1-p1.