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FOC1_g10004166-t38_1-p1
Basic Information
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Species
Fusarium oxysporum
Lineage
Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium oxysporum
CAZyme ID
FOC1_g10004166-t38_1-p1
CAZy Family
CE5
CAZyme Description
hypothetical protein
CAZyme Property
Protein Length
CGC
Molecular Weight
Isoelectric Point
403
45324.05
4.9921
Genome Property
Genome Version/Assembly ID
Genes
Strain NCBI Taxon ID
Non Protein Coding Genes
Protein Coding Genes
FungiDB-61_Foxysporumrace1
15626
1229664
188
15438
Gene Location
No EC number prediction in FOC1_g10004166-t38_1-p1.
Family
Start
End
Evalue
family coverage
GH28
145
369
6.2e-32
0.6338461538461538
Cdd ID
Domain
E-Value
qStart
qEnd
sStart
sEnd
Domain Description
227721
Pgu1
6.51e-05
187
233
288
338
Polygalacturonase [Carbohydrate transport and metabolism].
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395231
Glyco_hydro_28
0.004
187
368
139
305
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
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Hit ID
E-Value
Query Start
Query End
Hit Start
Hit End
1.61e-276
1
403
1
484
6.77e-255
1
401
1
482
6.77e-255
1
401
1
482
6.77e-255
1
401
1
482
5.55e-254
1
401
1
482
FOC1_g10004166-t38_1-p1 has no PDB hit.
Hit ID
E-Value
Query Start
Query End
Hit Start
Hit End
Description
9.65e-06
144
368
254
456
Probable endopolygalacturonase D OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pgaD PE=3 SV=1
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This protein is predicted as SP
Other
SP_Sec_SPI
CS Position
0.000445
0.999522
CS pos: 23-24. Pr: 0.9619
There is no transmembrane helices in FOC1_g10004166-t38_1-p1.
