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CAZyme Information: FGRAMPH1_01T25683-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Fusarium graminearum | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium graminearum | |||||||||||
| CAZyme ID | FGRAMPH1_01T25683-p1 | |||||||||||
| CAZy Family | GT32 | |||||||||||
| CAZyme Description | pectate lyase A | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL1 | 80 | 253 | 3.7e-109 | 0.9943181818181818 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 214765 | Amb_all | 4.51e-57 | 83 | 252 | 12 | 186 | Amb_all domain. |
| 226384 | PelB | 2.13e-50 | 56 | 335 | 62 | 344 | Pectate lyase [Carbohydrate transport and metabolism]. |
| 366158 | Pec_lyase_C | 2.04e-35 | 85 | 252 | 32 | 211 | Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 3.40e-254 | 1 | 336 | 1 | 336 | |
| 3.40e-254 | 1 | 336 | 1 | 336 | |
| 3.40e-254 | 1 | 336 | 1 | 336 | |
| 3.40e-254 | 1 | 336 | 1 | 336 | |
| 3.40e-254 | 1 | 336 | 1 | 336 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.73e-37 | 29 | 266 | 3 | 261 | Crystal structure of pectate lyase Bsp165PelA from Bacillus sp. N165 [Bacillus sp. N16-5],3VMW_A Crystal structure of pectate lyase Bsp165PelA from Bacillus sp. N165 in complex with trigalacturonate [Bacillus sp. N16-5] |
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| 2.60e-34 | 85 | 335 | 130 | 415 | Structure of the thermostable pectate lyase PL 47 [Bacillus sp. TS-47] |
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| 6.84e-29 | 42 | 335 | 21 | 331 | Catalytic function and substrate recognition of the pectate lyase from Thermotoga maritima [Thermotoga maritima] |
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| 5.02e-24 | 32 | 252 | 10 | 276 | Chain A, PECTATE LYASE E [Dickeya chrysanthemi] |
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| 6.16e-24 | 61 | 230 | 107 | 296 | Structural insights into the loss of catalytic competence in pectate lyase at low pH [Bacillus subtilis],5X2I_A Polygalacturonate Lyase by Fusing with a Self-assembling Amphipathic Peptide [Bacillus subtilis subsp. subtilis str. 168] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.54e-53 | 32 | 331 | 44 | 322 | Pectate lyase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyA PE=1 SV=1 |
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| 2.11e-53 | 12 | 287 | 10 | 289 | Probable pectate lyase B OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyB PE=3 SV=1 |
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| 2.11e-53 | 12 | 287 | 10 | 289 | Probable pectate lyase B OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyB PE=3 SV=1 |
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| 1.75e-51 | 32 | 287 | 38 | 288 | Probable pectate lyase B OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyB PE=3 SV=1 |
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| 4.99e-51 | 32 | 287 | 39 | 289 | Pectate lyase plyB OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyB PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000197 | 0.999743 | CS pos: 17-18. Pr: 0.9833 |