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CAZyme Information: FGRAMPH1_01T19219-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Fusarium graminearum | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium graminearum | |||||||||||
| CAZyme ID | FGRAMPH1_01T19219-p1 | |||||||||||
| CAZy Family | GH43|CBM6 | |||||||||||
| CAZyme Description | cellobiose dehydrogenase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| AA3 | 16 | 537 | 1.3e-197 | 0.9835766423357665 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 225186 | BetA | 3.88e-46 | 18 | 536 | 1 | 535 | Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]. |
| 274888 | Rv0697 | 3.07e-32 | 26 | 536 | 2 | 487 | dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. |
| 235000 | PRK02106 | 2.81e-23 | 22 | 536 | 3 | 533 | choline dehydrogenase; Validated |
| 398739 | GMC_oxred_C | 4.22e-17 | 426 | 530 | 24 | 143 | GMC oxidoreductase. This domain found associated with pfam00732. |
| 215420 | PLN02785 | 1.99e-16 | 13 | 535 | 44 | 577 | Protein HOTHEAD |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 0.0 | 1 | 539 | 1 | 539 | |
| 0.0 | 1 | 539 | 1 | 539 | |
| 0.0 | 1 | 539 | 1 | 539 | |
| 0.0 | 1 | 539 | 52 | 590 | |
| 0.0 | 1 | 539 | 1 | 542 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.64e-95 | 8 | 535 | 213 | 764 | Cellobiose dehydrogenase from Neurospora crassa, NcCDH [Neurospora crassa OR74A],4QI7_B Cellobiose dehydrogenase from Neurospora crassa, NcCDH [Neurospora crassa OR74A] |
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| 1.36e-92 | 25 | 537 | 8 | 545 | Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides],4QI5_A Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides] |
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| 2.09e-90 | 25 | 537 | 230 | 767 | Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides] |
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| 8.78e-90 | 19 | 537 | 2 | 542 | Chain A, cellobiose dehydrogenase [Phanerodontia chrysosporium],1KDG_B Chain B, cellobiose dehydrogenase [Phanerodontia chrysosporium] |
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| 1.08e-89 | 23 | 537 | 1 | 537 | Chain A, Cellobiose dehydrogenase [Phanerodontia chrysosporium],1NAA_B Chain B, Cellobiose dehydrogenase [Phanerodontia chrysosporium] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 8.62e-87 | 19 | 537 | 229 | 769 | Cellobiose dehydrogenase OS=Phanerodontia chrysosporium OX=2822231 GN=CDH-1 PE=1 SV=1 |
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| 4.88e-25 | 25 | 536 | 6 | 534 | Oxygen-dependent choline dehydrogenase OS=Paraburkholderia xenovorans (strain LB400) OX=266265 GN=betA PE=3 SV=1 |
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| 7.09e-24 | 25 | 536 | 6 | 534 | Oxygen-dependent choline dehydrogenase OS=Paraburkholderia phymatum (strain DSM 17167 / CIP 108236 / LMG 21445 / STM815) OX=391038 GN=betA PE=3 SV=1 |
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| 9.27e-24 | 25 | 536 | 3 | 533 | Oxygen-dependent choline dehydrogenase OS=Yersinia pestis bv. Antiqua (strain Nepal516) OX=377628 GN=betA PE=3 SV=1 |
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| 9.27e-24 | 25 | 536 | 3 | 533 | Oxygen-dependent choline dehydrogenase OS=Yersinia pestis bv. Antiqua (strain Antiqua) OX=360102 GN=betA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000858 | 0.999114 | CS pos: 17-18. Pr: 0.9688 |