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CAZyme Information: FGRAMPH1_01T15293-p1

You are here: Home > Sequence: FGRAMPH1_01T15293-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Fusarium graminearum
Lineage Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium graminearum
CAZyme ID FGRAMPH1_01T15293-p1
CAZy Family GH28
CAZyme Description pectinesterase family
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
2518 HG970333|CGC52 263599.93 4.9875
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_FgraminearumPH-1 14145 229533 2 14143
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC - - - - -

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 1057 1355 3.4e-67 0.9826388888888888
CE8 1757 2044 9.6e-63 0.96875
CE8 1407 1684 1.3e-60 0.9305555555555556
CE8 724 993 2e-44 0.90625
CE8 322 597 1.3e-20 0.96875

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395871 Pectinesterase 5.75e-40 1057 1356 3 296
Pectinesterase.
215357 PLN02665 1.19e-38 1758 2051 75 360
pectinesterase family protein
178051 PLN02432 8.98e-38 1056 1361 13 292
putative pectinesterase
395871 Pectinesterase 3.52e-37 1756 2044 5 294
Pectinesterase.
178372 PLN02773 2.94e-36 1404 1679 6 270
pectinesterase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 2518 1 2518
0.0 1 2518 1 2518
0.0 1 2518 1 2523
0.0 1 2518 1 2522
0.0 1 2517 1 2594

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.30e-37 1051 1362 6 296
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
2.39e-37 1051 1362 6 296
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
1.25e-27 1053 1361 6 308
Pectin methylesterase from Carrot [Daucus carota]
1.12e-25 1058 1361 7 304
Chain A, Pectinesterase 1 [Solanum lycopersicum]
1.98e-16 1061 1356 12 335
Chain A, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7.62e-44 1050 1367 22 331
Pectinesterase OS=Aspergillus niger OX=5061 GN=pme1 PE=1 SV=1
4.77e-43 1050 1362 22 327
Pectinesterase OS=Aspergillus aculeatus OX=5053 GN=pme1 PE=2 SV=1
7.19e-39 1051 1362 32 322
Pectinesterase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pmeA PE=1 SV=1
3.22e-38 1066 1362 43 321
Probable pectinesterase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pmeA PE=3 SV=1
2.18e-37 1067 1376 101 398
Probable pectinesterase 15 OS=Arabidopsis thaliana OX=3702 GN=PME15 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000263 0.999698 CS pos: 17-18. Pr: 0.9775

TMHMM  Annotations      help

There is no transmembrane helices in FGRAMPH1_01T15293-p1.