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CAZyme Information: FGRAMPH1_01T14007-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Fusarium graminearum | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium graminearum | |||||||||||
| CAZyme ID | FGRAMPH1_01T14007-p1 | |||||||||||
| CAZy Family | GH18 | |||||||||||
| CAZyme Description | pectate lyase precursor | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 4.2.2.2:31 |
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CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL1 | 76 | 257 | 3.7e-86 | 0.994475138121547 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 214765 | Amb_all | 1.10e-68 | 83 | 260 | 8 | 189 | Amb_all domain. |
| 226384 | PelB | 3.86e-64 | 44 | 321 | 46 | 340 | Pectate lyase [Carbohydrate transport and metabolism]. |
| 366158 | Pec_lyase_C | 2.62e-44 | 91 | 257 | 34 | 211 | Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 9.84e-232 | 1 | 324 | 1 | 324 | |
| 9.84e-232 | 1 | 324 | 1 | 324 | |
| 9.84e-232 | 1 | 324 | 1 | 324 | |
| 9.84e-232 | 1 | 324 | 1 | 324 | |
| 9.84e-232 | 1 | 324 | 1 | 324 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.63e-39 | 38 | 259 | 6 | 248 | Crystal structure of pectate lyase Bsp165PelA from Bacillus sp. N165 [Bacillus sp. N16-5],3VMW_A Crystal structure of pectate lyase Bsp165PelA from Bacillus sp. N165 in complex with trigalacturonate [Bacillus sp. N16-5] |
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| 9.71e-33 | 33 | 306 | 5 | 329 | Chain A, PECTATE LYASE E [Dickeya chrysanthemi] |
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| 9.82e-27 | 45 | 243 | 20 | 222 | Catalytic function and substrate recognition of the pectate lyase from Thermotoga maritima [Thermotoga maritima] |
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| 1.12e-25 | 37 | 321 | 3 | 323 | Chain A, Pectate lyase II [Xanthomonas campestris pv. campestris],2QY1_B Chain B, Pectate lyase II [Xanthomonas campestris pv. campestris] |
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| 7.82e-25 | 37 | 321 | 3 | 323 | Chain A, pectate lyase II [Xanthomonas campestris pv. campestris],2QXZ_B Chain B, pectate lyase II [Xanthomonas campestris pv. campestris] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3.78e-163 | 1 | 324 | 1 | 326 | Pectate lyase plyB OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyB PE=1 SV=1 |
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| 9.92e-161 | 1 | 324 | 1 | 325 | Probable pectate lyase B OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyB PE=3 SV=1 |
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| 1.19e-159 | 1 | 324 | 1 | 326 | Probable pectate lyase B OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyB PE=3 SV=1 |
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| 1.19e-159 | 1 | 324 | 1 | 326 | Probable pectate lyase B OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyB PE=3 SV=1 |
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| 5.18e-104 | 33 | 324 | 43 | 329 | Pectate lyase B OS=Colletotrichum gloeosporioides OX=474922 GN=PLB PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000293 | 0.999679 | CS pos: 23-24. Pr: 0.9711 |