CAZyme Information: FGRAMPH1_01T11943-p1

Basic Information

• Species: Fusarium graminearum
• Lineage: Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium graminearum
• CAZyme ID: FGRAMPH1_01T11943-p1
• CAZy Family: GH12
• CAZyme Description: glycoside hydrolase family 93

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
381	HG970333|CGC54	42576.40	9.0510

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_FgraminearumPH-1	14145	229533	2	14143

• Gene Location: location=HG970333:4095632-4096827(-)

Full Sequence      

MRFAAIVSFLLPLVAAKPAQKGKTFSNVEIFDPPTNYRDPQVLYARPLELSDGTLLGTWE
NYSPEPPNVWFPIVKSKDGGKTWKEISKVKDTQNNWGLRYQPQLYELPRAFGKYPKGTVL
CSGSSIPSDLSETLIEVYASRDKGYTWEFVSHVALGGEALPNPGLTPVWEPFLMTYKEKL
ILYYSDQRDNATHSQKLVHQTTTDLKKWSKVVDDTKYADYYARPGMPTVAKLPNNEYIYV
YEYGGGPNPPAGSDYWFPVYYRLSKDPQKFLNKAHHQIVSNDGTTPAGSPYVVWTPYGGK
NGTIVVSCGTRSEIFTNQALGDASAWKKWDVPQPTAYTRSLLTFQKDPDLLMIMGAGILP
PAGGKNTVSASVVRLSEVMKS

Enzyme Prediction     

EC	3.2.1.-:5

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH93	40	354	9.7e-117	0.996742671009772

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
271234	Sialidase_non-viral	1.68e-10	22	247	122	328	Non-viral sialidases. Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates, they play vital roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial and eukaryotic sialidases.
271234	Sialidase_non-viral	0.009	48	147	20	125	Non-viral sialidases. Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates, they play vital roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial and eukaryotic sialidases.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
CEF77774.1|GH93	4.78e-295	1	381	1	381
CZS81069.1|GH93	1.37e-294	1	381	1	381
QPC59098.1|GH93	7.93e-294	1	381	1	381
EYB24030.1|GH93|3.2.1.-	7.93e-294	1	381	1	381
QPC70503.1|GH93	1.13e-293	1	381	1	381

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
2W5N_A	4.57e-286	15	381	1	367	Chain A, Alpha-l-arabinofuranosidase [Fusarium graminearum]
2YDT_A	2.64e-285	15	381	1	367	Chain A, Exo-1,5-alpha-l-arabinofuranobiosidase [Fusarium graminearum],5M1Z_A Chain A, Exo-1,5-alpha-L-arabinofuranobiosidase [Fusarium graminearum]
2YDP_A	2.17e-284	15	381	1	367	Chain A, Exo-1,5-alpha-l-arabinofuranobiosidase [Fusarium graminearum],2YDP_B Chain B, Exo-1,5-alpha-l-arabinofuranobiosidase [Fusarium graminearum],2YDP_C Chain C, Exo-1,5-alpha-l-arabinofuranobiosidase [Fusarium graminearum]
2W5O_A	1.71e-281	15	381	1	367	Chain A, ALPHA-L-ARABINOFURANOSIDASE [Fusarium graminearum]
3A71_A	1.25e-138	24	379	5	355	High resolution structure of Penicillium chrysogenum alpha-L-arabinanase [Penicillium chrysogenum],3A72_A High resolution structure of Penicillium chrysogenum alpha-L-arabinanase complexed with arabinobiose [Penicillium chrysogenum]

Swiss-Prot Hits     

FGRAMPH1_01T11943-p1 has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000256	0.999720	CS pos: 16-17. Pr: 0.9771

TMHMM  Annotations     

There is no transmembrane helices in FGRAMPH1_01T11943-p1.