logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: FGRAMPH1_01T11613-p1

You are here: Home > Sequence: FGRAMPH1_01T11613-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Fusarium graminearum
Lineage Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium graminearum
CAZyme ID FGRAMPH1_01T11613-p1
CAZy Family GH109
CAZyme Description cellobiose dehydrogenase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
535 57914.97 9.6553
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_FgraminearumPH-1 14145 229533 2 14143
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in FGRAMPH1_01T11613-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA3 19 534 1.7e-198 0.9799270072992701

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
225186 BetA 1.35e-46 26 534 7 535
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
274888 Rv0697 5.01e-36 28 528 2 483
dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function.
235000 PRK02106 4.87e-26 24 533 3 532
choline dehydrogenase; Validated
366272 GMC_oxred_N 7.61e-19 111 325 26 218
GMC oxidoreductase. This family of proteins bind FAD as a cofactor.
215420 PLN02785 6.35e-13 13 333 42 337
Protein HOTHEAD

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 535 1 535
0.0 1 535 1 535
0.0 1 535 1 535
0.0 1 535 1 535
0.0 1 535 1 537

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.68e-92 16 534 216 765
Cellobiose dehydrogenase from Neurospora crassa, NcCDH [Neurospora crassa OR74A],4QI7_B Cellobiose dehydrogenase from Neurospora crassa, NcCDH [Neurospora crassa OR74A]
4.65e-88 19 534 3 541
Chain A, cellobiose dehydrogenase [Phanerodontia chrysosporium],1KDG_B Chain B, cellobiose dehydrogenase [Phanerodontia chrysosporium]
8.06e-88 27 534 3 536
Chain A, Cellobiose dehydrogenase [Phanerodontia chrysosporium],1NAA_B Chain B, Cellobiose dehydrogenase [Phanerodontia chrysosporium]
3.27e-83 26 534 7 544
Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides],4QI5_A Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides]
8.86e-82 15 534 218 766
Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.24e-85 19 534 230 768
Cellobiose dehydrogenase OS=Phanerodontia chrysosporium OX=2822231 GN=CDH-1 PE=1 SV=1
6.78e-24 25 328 88 383
Ecdysone oxidase OS=Drosophila melanogaster OX=7227 GN=Eo PE=1 SV=2
5.78e-23 18 535 37 579
Choline dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Chdh PE=1 SV=1
2.42e-22 18 528 34 569
Choline dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Chdh PE=1 SV=1
4.83e-22 28 533 4 526
Oxygen-dependent choline dehydrogenase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) OX=347834 GN=betA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000639 0.999346 CS pos: 21-22. Pr: 0.6532

TMHMM  Annotations      help

There is no transmembrane helices in FGRAMPH1_01T11613-p1.