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CAZyme Information: EXJ70780.1

You are here: Home > Sequence: EXJ70780.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Cladophialophora psammophila
Lineage Ascomycota; Eurotiomycetes; ; Herpotrichiellaceae; Cladophialophora; Cladophialophora psammophila
CAZyme ID EXJ70780.1
CAZy Family GH31
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
477 AMGX01000008|CGC4 51862.88 5.2652
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_CpsammophilaCBS110553 13421 1182543 0 13421
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in EXJ70780.1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 63 409 1e-63 0.9261538461538461

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
177865 PLN02218 3.60e-34 115 413 152 425
polygalacturonase ADPG
395231 Glyco_hydro_28 1.71e-33 115 388 47 304
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
215426 PLN02793 9.46e-32 114 391 138 398
Probable polygalacturonase
215120 PLN02188 9.75e-30 42 387 51 374
polygalacturonase/glycoside hydrolase family protein
178580 PLN03003 1.00e-27 127 429 119 394
Probable polygalacturonase At3g15720

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.22e-151 14 430 13 430
3.23e-146 13 438 10 435
3.23e-146 13 438 10 435
3.23e-146 13 438 10 435
3.23e-146 13 438 10 435

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.22e-29 42 407 30 373
Crystal structure of endo-xylogalacturonan hydrolase from Aspergillus tubingensis [Aspergillus tubingensis]
1.81e-15 118 360 68 304
Endopolygalacturonase from the phytopathogenic fungus Fusarium moniliforme [Fusarium verticillioides]
1.94e-12 118 405 75 344
Chain A, endo-polygalacturonase [Evansstolkia leycettana]
2.59e-12 118 405 75 344
Chain A, Endo-polygalacturonase [Evansstolkia leycettana]
1.05e-11 118 405 67 336
Chain A, Endo-polygalacturonase [Evansstolkia leycettana]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.26e-70 25 425 32 422
Alpha-L-rhamnosidase rgxB OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=rgxB PE=2 SV=2
4.30e-60 10 424 15 437
Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=rgxA PE=2 SV=2
3.23e-59 10 424 15 437
Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus niger OX=5061 GN=rgxA PE=2 SV=1
6.78e-57 11 401 15 426
Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=rgxA PE=3 SV=2
6.78e-57 11 401 15 426
Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=rgxA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000432 0.999523 CS pos: 18-19. Pr: 0.9539

TMHMM  Annotations      help

There is no transmembrane helices in EXJ70780.1.