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CAZyme Information: ETI27026.1

You are here: Home > Sequence: ETI27026.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Cladophialophora carrionii
Lineage Ascomycota; Eurotiomycetes; ; Herpotrichiellaceae; Cladophialophora; Cladophialophora carrionii
CAZyme ID ETI27026.1
CAZy Family GH79
CAZyme Description Alginate_lyase2 domain-containing protein [Source:UniProtKB/TrEMBL;Acc:V9DK14]
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
256 KB822699|CGC1 27063.95 5.4601
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_CcarrioniiCBS160.54 10428 1279043 55 10373
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in ETI27026.1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL7 32 256 1.1e-86 0.9953271028037384

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
400923 Alginate_lyase2 1.67e-54 32 256 1 222
Alginate lyase. Alginate lyases are enzymes that degrade the linear polysaccharide alignate. They cleave the glycosidic linkage of alignate through a beta-elimination reaction. This family forms an all beta fold and is different to all alpha fold of pfam05426.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.87e-130 20 256 19 254
1.81e-127 1 256 1 248
2.57e-127 11 256 8 248
1.13e-125 12 256 7 246
1.13e-125 12 256 7 246

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.38e-67 22 256 3 231
Chain A, Glucuronan lyase [Trichoderma parareesei]
2.54e-14 33 240 2 200
Crystal structure of alginate lyase PA1167 from Pseudomonas aeruginosa at 2.0 A resolution [Pseudomonas aeruginosa PAO1],1VAV_B Crystal structure of alginate lyase PA1167 from Pseudomonas aeruginosa at 2.0 A resolution [Pseudomonas aeruginosa PAO1]

Swiss-Prot Hits      help

ETI27026.1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000251 0.999714 CS pos: 21-22. Pr: 0.9662

TMHMM  Annotations      help

There is no transmembrane helices in ETI27026.1.